Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052504

Identifier: 89052504

GI number: 89052504

Start: 12994

End: 13242

Strand: Reverse

Name: 89052504

Synonym: Jann_0013

Alternate gene names: NA

Gene position: 13242-12994 (Counterclockwise)

Preceding gene: 89052506

Following gene: 89052503

Centisome position: 0.31

GC content: 55.02

Gene sequence:

>249_bases
ATGAAGAAAATCGAACGAATGCAAACGGGCCTGCGCCTGGAAAAGGGCATGGTAAAGGTGCTGAAAGGCACAGCCGAGTA
TCTTGACATCTCCATGAGTGAGTTGGTGGAGGGGATTGTGCTGCATGCCTTCGACGCGGAGCCCGTGTTCAATGACACGA
CGCGGGCCAAGATCGCGGCCCTCTGTGACGTCTACGGGTTTGATCTGACATCAAAGGACGCCCATGGGCTGGAGGAGGAA
TTCCAATGA

Upstream 100 bases:

>100_bases
TCATGTGGGCCTCCTGTAGATTGCGGCAGCCTACGCTCTCTTCCCGCATGTGCAATCTGTTGTCTTGTTGTCATGACACG
AATCGGCAATACTGACGCCC

Downstream 100 bases:

>100_bases
CCTACGATGACATGCTGGATTTGATCCTTCAGGGTCAGATGCCGCCGGAGGGGTTCAGCCATCAGCACCATCTTGGGACC
GCCCATGCGGCCCTGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKKIERMQTGLRLEKGMVKVLKGTAEYLDISMSELVEGIVLHAFDAEPVFNDTTRAKIAALCDVYGFDLTSKDAHGLEEE
FQ

Sequences:

>Translated_82_residues
MKKIERMQTGLRLEKGMVKVLKGTAEYLDISMSELVEGIVLHAFDAEPVFNDTTRAKIAALCDVYGFDLTSKDAHGLEEE
FQ
>Mature_82_residues
MKKIERMQTGLRLEKGMVKVLKGTAEYLDISMSELVEGIVLHAFDAEPVFNDTTRAKIAALCDVYGFDLTSKDAHGLEEE
FQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9194; Mature: 9194

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIERMQTGLRLEKGMVKVLKGTAEYLDISMSELVEGIVLHAFDAEPVFNDTTRAKIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LCDVYGFDLTSKDAHGLEEEFQ
HHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIERMQTGLRLEKGMVKVLKGTAEYLDISMSELVEGIVLHAFDAEPVFNDTTRAKIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LCDVYGFDLTSKDAHGLEEEFQ
HHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA