| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658580
Identifier: 88658580
GI number: 88658580
Start: 730745
End: 731293
Strand: Reverse
Name: 88658580
Synonym: ECH_0721
Alternate gene names: NA
Gene position: 731293-730745 (Counterclockwise)
Preceding gene: 88657895
Following gene: 88658101
Centisome position: 62.17
GC content: 33.15
Gene sequence:
>549_bases ATGGAAGTTAGTAGGATAGTAGTTCTTATATGCAATATAGCGGTAATAACTGCTTCAGTTGTAGGATTAGCATTAAGTTG TGTGAATATGCAACATCAAGATTTGAGTTGCGTTATGGCTTGTATGTTTGTATTCTTTTTATTGTATGGCTTAGTATTAC TTTGTGCTAATTATCTGGGTGTAAAATTTGATAGAACTGTTAATATCTTATATAATAACACTATTGCTGATTGTACTGAC CAACATAATAAGGAAGAAAGAAGTAGTGTGTTGTCAAATTTGAAAGAAACTTTTTTTCAAACGAGACATAGGCAAGCATA TAGCTTTTCATATGCCATCGGTCAATCAGAAAGTGATAGTTCTGATATACAAGATCAGGACCTAAGTGATGGTGAGGATG TTCAATCTATTCAAGAAGTTTTATGTCAAGGTGATAGTGATGATGTTGAGTTTCCTATGGCTTCTTTTAATCGTGGTGTT AGTATGTACTTAGATTCTGCTGATGTGAATATGGGAATGGCAGAGAGATTCATTGAAAAGCATTCTTAA
Upstream 100 bases:
>100_bases GGATTTATGGTAGGGTAAGAAAATTATTAGAGCGTGTTTTTATTAATAAGTTAATTATATATTAAGAGATATTCATACGT GTTTGTAAAGGTGTTTTTGC
Downstream 100 bases:
>100_bases TAATAAAAAATAGTTTTTCTAATGATTAATAGTGTTATTCATAAGTTTACAGTTTTGTAAGATCTTAGATGTAATCATCA TAATAAACCAGTTTATAATA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MEVSRIVVLICNIAVITASVVGLALSCVNMQHQDLSCVMACMFVFFLLYGLVLLCANYLGVKFDRTVNILYNNTIADCTD QHNKEERSSVLSNLKETFFQTRHRQAYSFSYAIGQSESDSSDIQDQDLSDGEDVQSIQEVLCQGDSDDVEFPMASFNRGV SMYLDSADVNMGMAERFIEKHS
Sequences:
>Translated_182_residues MEVSRIVVLICNIAVITASVVGLALSCVNMQHQDLSCVMACMFVFFLLYGLVLLCANYLGVKFDRTVNILYNNTIADCTD QHNKEERSSVLSNLKETFFQTRHRQAYSFSYAIGQSESDSSDIQDQDLSDGEDVQSIQEVLCQGDSDDVEFPMASFNRGV SMYLDSADVNMGMAERFIEKHS >Mature_182_residues MEVSRIVVLICNIAVITASVVGLALSCVNMQHQDLSCVMACMFVFFLLYGLVLLCANYLGVKFDRTVNILYNNTIADCTD QHNKEERSSVLSNLKETFFQTRHRQAYSFSYAIGQSESDSSDIQDQDLSDGEDVQSIQEVLCQGDSDDVEFPMASFNRGV SMYLDSADVNMGMAERFIEKHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20373; Mature: 20373
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVSRIVVLICNIAVITASVVGLALSCVNMQHQDLSCVMACMFVFFLLYGLVLLCANYLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC VKFDRTVNILYNNTIADCTDQHNKEERSSVLSNLKETFFQTRHRQAYSFSYAIGQSESDS CCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SDIQDQDLSDGEDVQSIQEVLCQGDSDDVEFPMASFNRGVSMYLDSADVNMGMAERFIEK CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHH HS CC >Mature Secondary Structure MEVSRIVVLICNIAVITASVVGLALSCVNMQHQDLSCVMACMFVFFLLYGLVLLCANYLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC VKFDRTVNILYNNTIADCTDQHNKEERSSVLSNLKETFFQTRHRQAYSFSYAIGQSESDS CCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SDIQDQDLSDGEDVQSIQEVLCQGDSDDVEFPMASFNRGVSMYLDSADVNMGMAERFIEK CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHH HS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA