| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658338
Identifier: 88658338
GI number: 88658338
Start: 227093
End: 227974
Strand: Direct
Name: 88658338
Synonym: ECH_0243
Alternate gene names: NA
Gene position: 227093-227974 (Clockwise)
Preceding gene: 88658028
Following gene: 88658158
Centisome position: 19.31
GC content: 35.03
Gene sequence:
>882_bases ATGTCATGGCTTGATTTGTTAAAGTCTGTACTTACTTCTATTGTTGCTGGGGTGAGTGATTATACATCTTTTATATTGAA CAATACTGTAAATGGTACACTAGATGTTACACGTCGTAATGTTACAGCACTGCATGATATACTTAACAACACACTGACTA CTATTTCTAATAATGTGGTTTCTAATATTAGTAGTACTACTGATAGTATAGGAATAGTTACTAGTAGGATTGGTAATTAT ACATCGTTTATATTAAACAGTACTGTAGATAGTATACTAGATGTTACACGTCGTAATGTTACAATGCTATATGATATCTT TAACGGCACTTTTACTACTAGTAATACAGTTTCTAACATTAGTAGCACTACTGATAGTGTGGGAATGGCTACCAATAACA GCATAGTTAGTCAGGATAATGCAGCTTCTAATTATCATATAAATACTATTATGTATGTTGTTATGGCTTGTGCTATTTTA TGTATGATGCGTCATATTTGTCACCATTTTATGCAAGGAGTGCAAGGGGAAAGACGTGTTAGGCGTATTGCACGTGAGTT TAGTGAGATAAGAGAACCTCGGATGTCTTCTGATGTTAATATTACAGGTATGTCAAGAGCATCTATTTGTTGTGATTCTA GGGAAGATGTTGAAGTACAACAGAGTAGAGTTAATATAGAAGGGGAGGGGGGTGTTGCTACTCAGCTTGATCTTGAGTAC GTACCACAGAATGTATGCCATAGGTTGAGACATTGGATGGCTCGATTGTGTCATAGAAGAAGTACTGTATATAGTGTTGG TAGTGATTTAGGGATGGAATTAGATGTTATGTCTAGAGTTGAAGAAGAAACAGAATGTGTTGAAGAAAGTATGTCTTTTT AG
Upstream 100 bases:
>100_bases ATGATTCATTTTTGCTGTTTGGTAGGTTACCTTGTTATGAATATTGATTTAGACGAGAATTATTATATAATTGATAACAT ATCTTGATTTTTTTCTACTC
Downstream 100 bases:
>100_bases ATATTTTGTGATTTGCTATTATATTTAGCAGTTATTCTCAAGAGATAGGGAAGTTACATTTCATCCGATTACTAAATTCA CATGCAATACGTCTTTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSWLDLLKSVLTSIVAGVSDYTSFILNNTVNGTLDVTRRNVTALHDILNNTLTTISNNVVSNISSTTDSIGIVTSRIGNY TSFILNSTVDSILDVTRRNVTMLYDIFNGTFTTSNTVSNISSTTDSVGMATNNSIVSQDNAASNYHINTIMYVVMACAIL CMMRHICHHFMQGVQGERRVRRIAREFSEIREPRMSSDVNITGMSRASICCDSREDVEVQQSRVNIEGEGGVATQLDLEY VPQNVCHRLRHWMARLCHRRSTVYSVGSDLGMELDVMSRVEEETECVEESMSF
Sequences:
>Translated_293_residues MSWLDLLKSVLTSIVAGVSDYTSFILNNTVNGTLDVTRRNVTALHDILNNTLTTISNNVVSNISSTTDSIGIVTSRIGNY TSFILNSTVDSILDVTRRNVTMLYDIFNGTFTTSNTVSNISSTTDSVGMATNNSIVSQDNAASNYHINTIMYVVMACAIL CMMRHICHHFMQGVQGERRVRRIAREFSEIREPRMSSDVNITGMSRASICCDSREDVEVQQSRVNIEGEGGVATQLDLEY VPQNVCHRLRHWMARLCHRRSTVYSVGSDLGMELDVMSRVEEETECVEESMSF >Mature_292_residues SWLDLLKSVLTSIVAGVSDYTSFILNNTVNGTLDVTRRNVTALHDILNNTLTTISNNVVSNISSTTDSIGIVTSRIGNYT SFILNSTVDSILDVTRRNVTMLYDIFNGTFTTSNTVSNISSTTDSVGMATNNSIVSQDNAASNYHINTIMYVVMACAILC MMRHICHHFMQGVQGERRVRRIAREFSEIREPRMSSDVNITGMSRASICCDSREDVEVQQSRVNIEGEGGVATQLDLEYV PQNVCHRLRHWMARLCHRRSTVYSVGSDLGMELDVMSRVEEETECVEESMSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32681; Mature: 32550
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLDLLKSVLTSIVAGVSDYTSFILNNTVNGTLDVTRRNVTALHDILNNTLTTISNNVV CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH SNISSTTDSIGIVTSRIGNYTSFILNSTVDSILDVTRRNVTMLYDIFNGTFTTSNTVSNI HHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEEEEHHCCCCCCCCHHHHH SSTTDSVGMATNNSIVSQDNAASNYHINTIMYVVMACAILCMMRHICHHFMQGVQGERRV HHCHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RRIAREFSEIREPRMSSDVNITGMSRASICCDSREDVEVQQSRVNIEGEGGVATQLDLEY HHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHH VPQNVCHRLRHWMARLCHRRSTVYSVGSDLGMELDVMSRVEEETECVEESMSF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SWLDLLKSVLTSIVAGVSDYTSFILNNTVNGTLDVTRRNVTALHDILNNTLTTISNNVV CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH SNISSTTDSIGIVTSRIGNYTSFILNSTVDSILDVTRRNVTMLYDIFNGTFTTSNTVSNI HHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEEEEHHCCCCCCCCHHHHH SSTTDSVGMATNNSIVSQDNAASNYHINTIMYVVMACAILCMMRHICHHFMQGVQGERRV HHCHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RRIAREFSEIREPRMSSDVNITGMSRASICCDSREDVEVQQSRVNIEGEGGVATQLDLEY HHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHH VPQNVCHRLRHWMARLCHRRSTVYSVGSDLGMELDVMSRVEEETECVEESMSF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA