| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658243
Identifier: 88658243
GI number: 88658243
Start: 167336
End: 169978
Strand: Direct
Name: 88658243
Synonym: ECH_0176
Alternate gene names: NA
Gene position: 167336-169978 (Clockwise)
Preceding gene: 88658354
Following gene: 88657681
Centisome position: 14.23
GC content: 28.38
Gene sequence:
>2643_bases ATGAGACTTTTGATATATTCTGGTGGGACAATTTTAGTATTTTTATTATTTTTAATAATTTCTCCTTTTTTTATTAATTG GAATTCTTATTATGCGTCTCATGTGCTTAAACAAATAGAGGATATATCAGGTGATGTATCTGTAAAGGGTGTGGGGAAAG TTACCGGGAGATTAATCTTACCTAAAATTGTGATCAATAATTTATATATAGAAGGTCATGGCAACGAATTATTAAATCAT AAATCAACAATATTAATTAGCCGACTTGAATTAAAGATATCATTGTTATCTTTATTACTGTTTTCTCCTAAAGTTAATGC AATTACTATAGATGGGTTAAATATTCCATTAGGTAATCTTCTTGATCTATTTTCTTCATTTCAATCTAAAAATTTTAATA TAAAAACGTTTAATGTTTTTAATAGTGTTGTTAATACAAGTTATGATGGTACATCTTTTAATAGTAAGCCTATATCCATT AAAAGTGGAACTATAAAAACAGTTAGTGATATGAAGGTAATAAATGGTTTATTAAGTATCGGTAAAAATGATTATAATGT AGTTGCTGATATATCATTAAATGAAGAGCATAGAATTAATGCAAATATTTATTCTCAATCAACAAAGGTAACTTTGTCTG GTGTAGCTGCTGGTAATGCATTTGATGGTGTGATATTAACTAATGGGAGTGATTTTTCACAGTTTATTAATGATATTTCT GAGACCAATAAAACTTCTATCTTTTCTTTCATTAATTCTCATGAAGAGTTTTCTTTATCCACTAATATAAAATTATTAGA TAAAACTTTTGAATTAAATGATTTCAAATTGTCTACTGATAGTATGGAGGGGATAGGAAAAGTAATCTGTTCAAATTATG CATCATGTAGTGCTAATATTGATTTTTCGAGAATTGATGTGGACCGTTTGTATGGAGTTAAACATGAAAGTGATGTTTAT AGAAAAGATTCTCGTACCCTTGACTACTTGAATACATTAATATCTGAAAATTTAAACTATAACATTAAAGCTAGTGCTAA AGAAATAAAGTACCATGATCAAGTCTCTAGTAATTTAATAATGGATTTAGAAGTATCCAAGGGAAAAATTAGCATCAATC AAATGACAATTATGTTACCTGGTAATAATAATGTATTACATGTTGAAGGTAATGTTGGCAGTAATGATTTGATTTCTAGT TTTCATGGAAAACTGAAGATAAATGGGGATGACTTTTGTTCTTTTGCTAAGTGGTTATTTCCAATACAAGTTGAATCGAA ATCTAGTGATAAATTTTCTATACAAAGTGATTTATACGTAGCTCCTAGAGTATTTTCTTTATCTCATATTGAAGTATTAA CTGACAGTTTTGGAGACGTAAAAGGGCAATTAAGGATAAAGTATGATAGGAAAGGTAGTGCTGTTGTTGGGGATATAGAA ATACATAATATTGATTTTGATCAGTACAAGATAAATGAAAAATTGAAAATAGAAGACTTTATGCCGATGAAATGGTTAAA GGACATAAAGTATAAAATAAATGTTGATACTAATATTAGTGATTTTATTATTCAAAAACAGCAGGTGAGTAATCTAAGCT TTTTAGTTAATGTAATGCAAAGTAAGTTTGCCATTGATAAAATACGCTTTAATGGTGCTGATGGATCTGATCTTAGTGGA TTTATTAAAGCTTACATTGGATCTCAGGATCTAAAGCCAAAAATATTAGTTAGTCTTAAGGGTAATAAGTATAATACTGC ATTCATAAAATTTCCTTCTTTGATACGTTATGTCCTTGATGGATCAAATAAAGTCACTAATATAAAATGGTCAAATGAAG ATCTAAAATTTTATGGATTAGAGCATGTAGATGGTAATATTGATATTAATATTAAAAATTTTATTTCTAAAGATAATTCA TTAAAGGACTTTGTATTATCATCTAGTTTAAAAGATAATTTAATGTCTGTTAACAAACTTATGTTTAAGGTAGATGATGG GTTTGTATCAGCTAGTGGTAAAATAGGTATGGGTTCTAATACTTATTCATTATCTGCTGTTCTGTCTATAGCCAATATTG GATTGAATAATTTGCTTAAGCATATAAATGTTGATGGAATTACTGGAAATGTAAGTATTAGTGGTAGTGTTCAAACCCAG GGTAAGACTTTAGTTGATTGGATTAATGCTTTAGATGGTAAAATGGAAGTAGTTGCTAAGGGTGTGAATGTTGTTGGAGT AGATTTTAATAAATTTATTATAAGTTTATTAGATGTTCAGAGTAAATCAGATGTTGCTGCGTTAACTCAGATTGGATTGT ATGAAAATAATACAGTATTTAATTTTATTAGTGCTGGAGCTAATATAAGAAGGGGTAATATTATATCTTCCTTGCAATTT GCAATTGACAATGCTAGTGGCATGGCATCTGCAAATATTTCTTTATTACAGTTTGCTGTGATGTCTAAAATTAGGTTATC ATTTATACGTCCTAATGTGTCTTCTCCATCTAATGTAGATATGTCATTAAATGGTCAATTATGGCAACCTAGGATAAATT TTAATGTAAATGCTCTGTATGAAGAGATTGTGAAGGGAGGTAGTCAATCTGTTTCGGCACATGATGAAGAGTTTATAGAT TAA
Upstream 100 bases:
>100_bases TAAGCATCGCTATTTATTGGGTTATACTTTCCCTGATATTTTTATACATGATTAATATTATTTATGATAAACAAATAGTA GATGTTTTTTTGGTTCGTCG
Downstream 100 bases:
>100_bases AGTTGCATAATTATATAGGAAATAATAGTTCATACATTGAAGCATGCCTTTTTGTTAATGTTAGAAATACTAAGGTTTTG TTTTGACAGATTATTTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 880; Mature: 880
Protein sequence:
>880_residues MRLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISGDVSVKGVGKVTGRLILPKIVINNLYIEGHGNELLNH KSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNLLDLFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISI KSGTIKTVSDMKVINGLLSIGKNDYNVVADISLNEEHRINANIYSQSTKVTLSGVAAGNAFDGVILTNGSDFSQFINDIS ETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEGIGKVICSNYASCSANIDFSRIDVDRLYGVKHESDVY RKDSRTLDYLNTLISENLNYNIKASAKEIKYHDQVSSNLIMDLEVSKGKISINQMTIMLPGNNNVLHVEGNVGSNDLISS FHGKLKINGDDFCSFAKWLFPIQVESKSSDKFSIQSDLYVAPRVFSLSHIEVLTDSFGDVKGQLRIKYDRKGSAVVGDIE IHNIDFDQYKINEKLKIEDFMPMKWLKDIKYKINVDTNISDFIIQKQQVSNLSFLVNVMQSKFAIDKIRFNGADGSDLSG FIKAYIGSQDLKPKILVSLKGNKYNTAFIKFPSLIRYVLDGSNKVTNIKWSNEDLKFYGLEHVDGNIDINIKNFISKDNS LKDFVLSSSLKDNLMSVNKLMFKVDDGFVSASGKIGMGSNTYSLSAVLSIANIGLNNLLKHINVDGITGNVSISGSVQTQ GKTLVDWINALDGKMEVVAKGVNVVGVDFNKFIISLLDVQSKSDVAALTQIGLYENNTVFNFISAGANIRRGNIISSLQF AIDNASGMASANISLLQFAVMSKIRLSFIRPNVSSPSNVDMSLNGQLWQPRINFNVNALYEEIVKGGSQSVSAHDEEFID
Sequences:
>Translated_880_residues MRLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISGDVSVKGVGKVTGRLILPKIVINNLYIEGHGNELLNH KSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNLLDLFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISI KSGTIKTVSDMKVINGLLSIGKNDYNVVADISLNEEHRINANIYSQSTKVTLSGVAAGNAFDGVILTNGSDFSQFINDIS ETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEGIGKVICSNYASCSANIDFSRIDVDRLYGVKHESDVY RKDSRTLDYLNTLISENLNYNIKASAKEIKYHDQVSSNLIMDLEVSKGKISINQMTIMLPGNNNVLHVEGNVGSNDLISS FHGKLKINGDDFCSFAKWLFPIQVESKSSDKFSIQSDLYVAPRVFSLSHIEVLTDSFGDVKGQLRIKYDRKGSAVVGDIE IHNIDFDQYKINEKLKIEDFMPMKWLKDIKYKINVDTNISDFIIQKQQVSNLSFLVNVMQSKFAIDKIRFNGADGSDLSG FIKAYIGSQDLKPKILVSLKGNKYNTAFIKFPSLIRYVLDGSNKVTNIKWSNEDLKFYGLEHVDGNIDINIKNFISKDNS LKDFVLSSSLKDNLMSVNKLMFKVDDGFVSASGKIGMGSNTYSLSAVLSIANIGLNNLLKHINVDGITGNVSISGSVQTQ GKTLVDWINALDGKMEVVAKGVNVVGVDFNKFIISLLDVQSKSDVAALTQIGLYENNTVFNFISAGANIRRGNIISSLQF AIDNASGMASANISLLQFAVMSKIRLSFIRPNVSSPSNVDMSLNGQLWQPRINFNVNALYEEIVKGGSQSVSAHDEEFID >Mature_880_residues MRLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISGDVSVKGVGKVTGRLILPKIVINNLYIEGHGNELLNH KSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNLLDLFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISI KSGTIKTVSDMKVINGLLSIGKNDYNVVADISLNEEHRINANIYSQSTKVTLSGVAAGNAFDGVILTNGSDFSQFINDIS ETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEGIGKVICSNYASCSANIDFSRIDVDRLYGVKHESDVY RKDSRTLDYLNTLISENLNYNIKASAKEIKYHDQVSSNLIMDLEVSKGKISINQMTIMLPGNNNVLHVEGNVGSNDLISS FHGKLKINGDDFCSFAKWLFPIQVESKSSDKFSIQSDLYVAPRVFSLSHIEVLTDSFGDVKGQLRIKYDRKGSAVVGDIE IHNIDFDQYKINEKLKIEDFMPMKWLKDIKYKINVDTNISDFIIQKQQVSNLSFLVNVMQSKFAIDKIRFNGADGSDLSG FIKAYIGSQDLKPKILVSLKGNKYNTAFIKFPSLIRYVLDGSNKVTNIKWSNEDLKFYGLEHVDGNIDINIKNFISKDNS LKDFVLSSSLKDNLMSVNKLMFKVDDGFVSASGKIGMGSNTYSLSAVLSIANIGLNNLLKHINVDGITGNVSISGSVQTQ GKTLVDWINALDGKMEVVAKGVNVVGVDFNKFIISLLDVQSKSDVAALTQIGLYENNTVFNFISAGANIRRGNIISSLQF AIDNASGMASANISLLQFAVMSKIRLSFIRPNVSSPSNVDMSLNGQLWQPRINFNVNALYEEIVKGGSQSVSAHDEEFID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97423; Mature: 97423
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISGDVSVKGVGKVTGRLIL CEEEEEECCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEE PKIVINNLYIEGHGNELLNHKSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNL EEEEEEEEEEEECCCHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH LDLFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISIKSGTIKTVSDMKVINGLLSI HHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHC GKNDYNVVADISLNEEHRINANIYSQSTKVTLSGVAAGNAFDGVILTNGSDFSQFINDIS CCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHH ETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEGIGKVICSNYASCSANI HCCHHHHHHHHCCCCCEEEECCEEEEEEEECCCCEEECCCHHHHHHHHHHCCCCCCCCCC DFSRIDVDRLYGVKHESDVYRKDSRTLDYLNTLISENLNYNIKASAKEIKYHDQVSSNLI CEEEECHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHHEEHHHCCCCEE MDLEVSKGKISINQMTIMLPGNNNVLHVEGNVGSNDLISSFHGKLKINGDDFCSFAKWLF EEEEECCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHCCCCEEEECCHHHHHHHHHEE PIQVESKSSDKFSIQSDLYVAPRVFSLSHIEVLTDSFGDVKGQLRIKYDRKGSAVVGDIE EEEEECCCCCCEEECCCEEECCEEEEEHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEE IHNIDFDQYKINEKLKIEDFMPMKWLKDIKYKINVDTNISDFIIQKQQVSNLSFLVNVMQ EEECCCCCEECCCEEEECCCCCHHHHCCCEEEEEECCCHHHHHEEHHHHHHHHHHHHHHH SKFAIDKIRFNGADGSDLSGFIKAYIGSQDLKPKILVSLKGNKYNTAFIKFPSLIRYVLD HHHEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHC GSNKVTNIKWSNEDLKFYGLEHVDGNIDINIKNFISKDNSLKDFVLSSSLKDNLMSVNKL CCCCEEEEEECCCCEEEEEEEECCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHE MFKVDDGFVSASGKIGMGSNTYSLSAVLSIANIGLNNLLKHINVDGITGNVSISGSVQTQ EEEECCCEEECCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECEEECC GKTLVDWINALDGKMEVVAKGVNVVGVDFNKFIISLLDVQSKSDVAALTQIGLYENNTVF CCHHHHHHHHCCCCEEEEECCCEEEEECHHHHHHHHHHCCCCCCHHHHHHCCEECCCCEE NFISAGANIRRGNIISSLQFAIDNASGMASANISLLQFAVMSKIRLSFIRPNVSSPSNVD EEECCCCCEECCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCE MSLNGQLWQPRINFNVNALYEEIVKGGSQSVSAHDEEFID EEECCEEECCEECCCHHHHHHHHHCCCCCCCCCCCHHHCC >Mature Secondary Structure MRLLIYSGGTILVFLLFLIISPFFINWNSYYASHVLKQIEDISGDVSVKGVGKVTGRLIL CEEEEEECCHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEE PKIVINNLYIEGHGNELLNHKSTILISRLELKISLLSLLLFSPKVNAITIDGLNIPLGNL EEEEEEEEEEEECCCHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH LDLFSSFQSKNFNIKTFNVFNSVVNTSYDGTSFNSKPISIKSGTIKTVSDMKVINGLLSI HHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHC GKNDYNVVADISLNEEHRINANIYSQSTKVTLSGVAAGNAFDGVILTNGSDFSQFINDIS CCCCCEEEEEEECCCCCEEEEEEECCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHH ETNKTSIFSFINSHEEFSLSTNIKLLDKTFELNDFKLSTDSMEGIGKVICSNYASCSANI HCCHHHHHHHHCCCCCEEEECCEEEEEEEECCCCEEECCCHHHHHHHHHHCCCCCCCCCC DFSRIDVDRLYGVKHESDVYRKDSRTLDYLNTLISENLNYNIKASAKEIKYHDQVSSNLI CEEEECHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCEEEEECHHHHEEHHHCCCCEE MDLEVSKGKISINQMTIMLPGNNNVLHVEGNVGSNDLISSFHGKLKINGDDFCSFAKWLF EEEEECCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHCCCCEEEECCHHHHHHHHHEE PIQVESKSSDKFSIQSDLYVAPRVFSLSHIEVLTDSFGDVKGQLRIKYDRKGSAVVGDIE EEEEECCCCCCEEECCCEEECCEEEEEHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEE IHNIDFDQYKINEKLKIEDFMPMKWLKDIKYKINVDTNISDFIIQKQQVSNLSFLVNVMQ EEECCCCCEECCCEEEECCCCCHHHHCCCEEEEEECCCHHHHHEEHHHHHHHHHHHHHHH SKFAIDKIRFNGADGSDLSGFIKAYIGSQDLKPKILVSLKGNKYNTAFIKFPSLIRYVLD HHHEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHC GSNKVTNIKWSNEDLKFYGLEHVDGNIDINIKNFISKDNSLKDFVLSSSLKDNLMSVNKL CCCCEEEEEECCCCEEEEEEEECCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHE MFKVDDGFVSASGKIGMGSNTYSLSAVLSIANIGLNNLLKHINVDGITGNVSISGSVQTQ EEEECCCEEECCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEECEEECC GKTLVDWINALDGKMEVVAKGVNVVGVDFNKFIISLLDVQSKSDVAALTQIGLYENNTVF CCHHHHHHHHCCCCEEEEECCCEEEEECHHHHHHHHHHCCCCCCHHHHHHCCEECCCCEE NFISAGANIRRGNIISSLQFAIDNASGMASANISLLQFAVMSKIRLSFIRPNVSSPSNVD EEECCCCCEECCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCE MSLNGQLWQPRINFNVNALYEEIVKGGSQSVSAHDEEFID EEECCEEECCEECCCHHHHHHHHHCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA