| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658168
Identifier: 88658168
GI number: 88658168
Start: 707168
End: 708001
Strand: Reverse
Name: 88658168
Synonym: ECH_0699
Alternate gene names: NA
Gene position: 708001-707168 (Counterclockwise)
Preceding gene: 88657743
Following gene: 88657682
Centisome position: 60.19
GC content: 31.18
Gene sequence:
>834_bases ATGTTTAGTAATAAATCCTTAGAAGATCTTATATCATGTAATAGTGTTCTATGTGCTAAGATAACCTCTCTTTTAAAGCT TCAAGTCAAAGAGTGTTATTTAATTGGTACTAATGGCCCTAGAGGTAAATTATTAGTTAGAGTTACTAAAACTCAAGAAA ATCTTTCTTTAGGTGTGGGTGTAGATCTAGGAAAGAATCTTTTCTTAATAAAGTGTAGAATACCACGTAGTGTAGTAATG CAAGATCGAGAGCTTAGGTCTCTTGTAGGTGGTCCTGTAATATTGAAGCGCTATGTTAAGCTCAATTTATACTTTATGGC TAAGGCAGAATGTTTTTCAGATTTTTTTTACAATATATGGAAACAAGTAGTAGAGTATGATGGATATAAGGATGTTTTTA ATTTTTGTTCTTATGGTAAACTTGTATTTGTTAGAGTACGTGGAGGAGATAGTGATAAACATTTTAATGAGTATCAAGCC TTAAAGAATATTGCGCAGTTAAATGCAGATTTTCTTTTGGAAGAAGAGAAAGGTTTATTGTCACGTAAAAAAGTACAGAA GTTAATAGAATCAGTAGATAATAGTGATGATTCATCCTTAGGTGCAGTAGGTGGAGCTTTAAGAGTGGTACCTAGTTTTC AGCAATCTAAACATCGGATACTAAAAAGTCGTGAATGTGAGTCAAAAGATAACATGATTCAATATTTAGAAGATCTTTCT ATACAACTTGAAGCTATGATTAGTAAAGATGAAGTGATTACATATTTAAAGAATATCTCTGTTCAATTTGAAAATATGAT CAGTAGAGATGATGAGTTATGTGGTCTAAAATAG
Upstream 100 bases:
>100_bases AGTTTGTGTAAAAATCATCATCTTTATTTGTATAATTTGTTTATTTTAATTAAAAAATACATACTATCATAATAAAATTA GGTAAGTTTGGTGGTAGTAT
Downstream 100 bases:
>100_bases CCAAGTCTTAAAGGCGATATCTAAAATGGTAATGCTAGTTATTTTCGTTATGCTTGCCTAAGTATATTTTTAAATATGGT AGTTGAGGTTTGTCTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MFSNKSLEDLISCNSVLCAKITSLLKLQVKECYLIGTNGPRGKLLVRVTKTQENLSLGVGVDLGKNLFLIKCRIPRSVVM QDRELRSLVGGPVILKRYVKLNLYFMAKAECFSDFFYNIWKQVVEYDGYKDVFNFCSYGKLVFVRVRGGDSDKHFNEYQA LKNIAQLNADFLLEEEKGLLSRKKVQKLIESVDNSDDSSLGAVGGALRVVPSFQQSKHRILKSRECESKDNMIQYLEDLS IQLEAMISKDEVITYLKNISVQFENMISRDDELCGLK
Sequences:
>Translated_277_residues MFSNKSLEDLISCNSVLCAKITSLLKLQVKECYLIGTNGPRGKLLVRVTKTQENLSLGVGVDLGKNLFLIKCRIPRSVVM QDRELRSLVGGPVILKRYVKLNLYFMAKAECFSDFFYNIWKQVVEYDGYKDVFNFCSYGKLVFVRVRGGDSDKHFNEYQA LKNIAQLNADFLLEEEKGLLSRKKVQKLIESVDNSDDSSLGAVGGALRVVPSFQQSKHRILKSRECESKDNMIQYLEDLS IQLEAMISKDEVITYLKNISVQFENMISRDDELCGLK >Mature_277_residues MFSNKSLEDLISCNSVLCAKITSLLKLQVKECYLIGTNGPRGKLLVRVTKTQENLSLGVGVDLGKNLFLIKCRIPRSVVM QDRELRSLVGGPVILKRYVKLNLYFMAKAECFSDFFYNIWKQVVEYDGYKDVFNFCSYGKLVFVRVRGGDSDKHFNEYQA LKNIAQLNADFLLEEEKGLLSRKKVQKLIESVDNSDDSSLGAVGGALRVVPSFQQSKHRILKSRECESKDNMIQYLEDLS IQLEAMISKDEVITYLKNISVQFENMISRDDELCGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31542; Mature: 31542
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNKSLEDLISCNSVLCAKITSLLKLQVKECYLIGTNGPRGKLLVRVTKTQENLSLGVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCEEEEC VDLGKNLFLIKCRIPRSVVMQDRELRSLVGGPVILKRYVKLNLYFMAKAECFSDFFYNIW CCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHH KQVVEYDGYKDVFNFCSYGKLVFVRVRGGDSDKHFNEYQALKNIAQLNADFLLEEEKGLL HHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEEHHHHHH SRKKVQKLIESVDNSDDSSLGAVGGALRVVPSFQQSKHRILKSRECESKDNMIQYLEDLS HHHHHHHHHHHHCCCCCCCHHHHCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH IQLEAMISKDEVITYLKNISVQFENMISRDDELCGLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MFSNKSLEDLISCNSVLCAKITSLLKLQVKECYLIGTNGPRGKLLVRVTKTQENLSLGVG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCEEEEC VDLGKNLFLIKCRIPRSVVMQDRELRSLVGGPVILKRYVKLNLYFMAKAECFSDFFYNIW CCCCCCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEHHHHHHHHHHHHH KQVVEYDGYKDVFNFCSYGKLVFVRVRGGDSDKHFNEYQALKNIAQLNADFLLEEEKGLL HHHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEEHHHHHH SRKKVQKLIESVDNSDDSSLGAVGGALRVVPSFQQSKHRILKSRECESKDNMIQYLEDLS HHHHHHHHHHHHCCCCCCCHHHHCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH IQLEAMISKDEVITYLKNISVQFENMISRDDELCGLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA