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The map label for this gene is recA [H]

Identifier: 88658117

GI number: 88658117

Start: 1132558

End: 1133631

Strand: Reverse

Name: recA [H]

Synonym: ECH_1109

Alternate gene names: 88658117

Gene position: 1133631-1132558 (Counterclockwise)

Preceding gene: 88658594

Following gene: 88657618

Centisome position: 96.38

GC content: 33.99

Gene sequence:

>1074_bases
ATGTCTGATAGCAAAAATTTAAACCAGGAAAGACAAAAAGCATTGGATAGCGCAATTAGTCAAATTGAAAAGGCTTTTGG
TCGTGGTGCAATAATGAAATTAAAACAAGGTGCTATTGAAAAAATAGATAGTATTTCTACTGGATCAATTGCGCTTGATA
CAGCTTTAGGCATTGGTGGGTTTCCTAAAGGTAGAATTGTTGAAATTTTTGGGCCTGAAAGTTCTGGTAAAACAACACTT
GCTTTGCATGTAATTGCTGAGTCACAAAAAAAGGGTGGGAATTGTGCATTTATTGATGCTGAACATGCTTTGGATATCAT
GTATGCTCGCAAATTAGGGGTAAATACTGGTGATTTGATCGTTTCTCAACCCGATACAGGTGAACAAGCATTACATATAG
TTGAGTATCTGGTTTGTTCTGGTGCTATTGATGTAATAGTAGTAGATTCTGTGGCTGCATTAACTCCTAGAGCAGAGATA
GAAGGTGATATGGGTGATCAACATATGGGGTTACAAGCTAGGTTGTTAAGTCATGCATTGAGGAAGTTAACTTCTATTGT
ATCAAAAGCTAATTGTGTTCTTATTTTTATTAATCAGATACGTATGAAAATAGGGGTAGTTTATGGAAATCCTGAAACTA
CTACTGGTGGCAATGCTTTAAAGTTTTATAGTTCTGTAAGATTAGATATACGTAAGGTAAGTGCAATTAAGGATAAGGAC
GTAATTATTGGTAATCAAACTAAGGTGAAAGTTGTTAAAAACAAGGTGGCTCCTCCTTTTAAACAAGTAGATTTTGATAT
CATGTATAATGAAGGTATCTCAAAGGTAGGAGAGATTATAGATATGGGTGTAAAACTTAATATTATTGAAAAAGCTGGGT
CATACTACTCGTATAATAGTGTGCGTCTTGGTCAAGGTAAAGAAAATGCAAAATCTTATCTTAAAGCTAATTGTGATACT
GCACATGAAATAGAACAGAAGATAAGAAGTATACTTGCAAGTGATAATGAAGTTAGTTGTTTCAATGCAGAGGTTAATGA
TAATCTTCATGAAGTAGAAGAAACAGTTTTTTAA

Upstream 100 bases:

>100_bases
TTTAAATTTGGTTTGTTTGAAATAAATGGTGCAATGATTTATAACTTGACAATTAATATTAAGAGTGATTAGCTTTTTTA
ATTTATAAAGTATTTATCAT

Downstream 100 bases:

>100_bases
GGTGTTTTGTTATGGAAGCGGATTTATTAAATAGTGATTCTATATATGGTGAATTTACTAAAATTGGGGTAATAATAAGT
GGTCACTTTGTATTATCTTC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSDSKNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGGFPKGRIVEIFGPESSGKTTL
ALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLIVSQPDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEI
EGDMGDQHMGLQARLLSHALRKLTSIVSKANCVLIFINQIRMKIGVVYGNPETTTGGNALKFYSSVRLDIRKVSAIKDKD
VIIGNQTKVKVVKNKVAPPFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNSVRLGQGKENAKSYLKANCDT
AHEIEQKIRSILASDNEVSCFNAEVNDNLHEVEETVF

Sequences:

>Translated_357_residues
MSDSKNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGGFPKGRIVEIFGPESSGKTTL
ALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLIVSQPDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEI
EGDMGDQHMGLQARLLSHALRKLTSIVSKANCVLIFINQIRMKIGVVYGNPETTTGGNALKFYSSVRLDIRKVSAIKDKD
VIIGNQTKVKVVKNKVAPPFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNSVRLGQGKENAKSYLKANCDT
AHEIEQKIRSILASDNEVSCFNAEVNDNLHEVEETVF
>Mature_356_residues
SDSKNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGGFPKGRIVEIFGPESSGKTTLA
LHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLIVSQPDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIE
GDMGDQHMGLQARLLSHALRKLTSIVSKANCVLIFINQIRMKIGVVYGNPETTTGGNALKFYSSVRLDIRKVSAIKDKDV
IIGNQTKVKVVKNKVAPPFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNSVRLGQGKENAKSYLKANCDTA
HEIEQKIRSILASDNEVSCFNAEVNDNLHEVEETVF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=349, Percent_Identity=59.8853868194842, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38733; Mature: 38602

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSKNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCC
FPKGRIVEIFGPESSGKTTLALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLI
CCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEE
VSQPDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHAL
EECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHH
RKLTSIVSKANCVLIFINQIRMKIGVVYGNPETTTGGNALKFYSSVRLDIRKVSAIKDKD
HHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCC
VIIGNQTKVKVVKNKVAPPFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNS
EEECCCCEEEEEHHCCCCCHHHCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCEEEECC
VRLGQGKENAKSYLKANCDTAHEIEQKIRSILASDNEVSCFNAEVNDNLHEVEETVF
EEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC
>Mature Secondary Structure 
SDSKNLNQERQKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCC
FPKGRIVEIFGPESSGKTTLALHVIAESQKKGGNCAFIDAEHALDIMYARKLGVNTGDLI
CCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCEE
VSQPDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHAL
EECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHH
RKLTSIVSKANCVLIFINQIRMKIGVVYGNPETTTGGNALKFYSSVRLDIRKVSAIKDKD
HHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCC
VIIGNQTKVKVVKNKVAPPFKQVDFDIMYNEGISKVGEIIDMGVKLNIIEKAGSYYSYNS
EEECCCCEEEEEHHCCCCCHHHCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCEEEECC
VRLGQGKENAKSYLKANCDTAHEIEQKIRSILASDNEVSCFNAEVNDNLHEVEETVF
EEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA