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The map label for this gene is 88658078

Identifier: 88658078

GI number: 88658078

Start: 384907

End: 385764

Strand: Direct

Name: 88658078

Synonym: ECH_0390

Alternate gene names: NA

Gene position: 384907-385764 (Clockwise)

Preceding gene: 88658645

Following gene: 88657675

Centisome position: 32.72

GC content: 30.54

Gene sequence:

>858_bases
GTGAATAGTAAAGAATTTTGTGATAAGAAATTAGTGCACATTAATGGATTTTCAATGATATTTTGGTGTATTGTTTTTAT
TTTGTTGTTGTTGTCTGGTATATACTATGGAAATTTTTTTATTGTGTTACCAATGTCTCTAGTGTCGTTAATTTGTACAT
TTATTATTCCAAGTGGATTTTTTGTGAATAATCCTAATGAAGCAAAAGTTGTTGAATTTTTTGGAAATTATATTGGGACT
ATATTTAAGTCAGGTTTTTTTTGGACTATTCCCTTTGTTCGCATGAGGTCAATTTCATTAAAGGTGAGAAATGTTAATAC
AAGTAAGATCAAAGTAAATGATTTTAATGGTAATCCAATAGAGATAGCTGCAGTAGTTGTGTGGCGAGTTGTGAGTCCTG
CAAAAGCTTGTCTTAATGTGAGTGATTATCAAGAGTTTATTAATATTCAAAATGAAGCTGCGGTTAGGGAATTAGCTGGT
AGCTATCCATATGATGCTGAAGATAATAGTGAATCTTTACGTAATAATTCGACAAAGATCTCGTCTAAGTTACGTGATAT
GTTACAGAATAGATTAGATTTGGTAGGTGTTATTGTAGAGGATGCACGAATATCACATTTAGCTTACTCTTCTGAGATAG
CTCAAATTATGTTAAGAAGGCAGCAAGCAAAAGCTATTACTAATGCTAGAGGATATATAGTAAGAAATGCAATCATTATG
GTAGACGAGATATTAAAGCATTTTGAATTGCAATATCAAATTAATCTTTCTGATGAGCAAAAAGTTAAACTTGTGAATAA
CCTTTTAGTATCTTTAATCTCAGAGCAAGGAACTCAACCTACTATTAATATAGAATAA

Upstream 100 bases:

>100_bases
TAATTTGATATACATAAGTGTACTATGTTGATGTTTTTATGTATCATCAATATTTACTGGATTATTGAAAGCAATATTCA
ATGCTTATGGGAGGCGTATT

Downstream 100 bases:

>100_bases
TATGTATTAGTATATTTTCAATAAGACTCAATGTGTGTAATGCATTTTAAATAGTTTATAATCCTGAACAAGTTTACATA
AATACTATATCATTTTTTGT

Product: SPFH domain-containing protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNSKEFCDKKLVHINGFSMIFWCIVFILLLLSGIYYGNFFIVLPMSLVSLICTFIIPSGFFVNNPNEAKVVEFFGNYIGT
IFKSGFFWTIPFVRMRSISLKVRNVNTSKIKVNDFNGNPIEIAAVVVWRVVSPAKACLNVSDYQEFINIQNEAAVRELAG
SYPYDAEDNSESLRNNSTKISSKLRDMLQNRLDLVGVIVEDARISHLAYSSEIAQIMLRRQQAKAITNARGYIVRNAIIM
VDEILKHFELQYQINLSDEQKVKLVNNLLVSLISEQGTQPTINIE

Sequences:

>Translated_285_residues
MNSKEFCDKKLVHINGFSMIFWCIVFILLLLSGIYYGNFFIVLPMSLVSLICTFIIPSGFFVNNPNEAKVVEFFGNYIGT
IFKSGFFWTIPFVRMRSISLKVRNVNTSKIKVNDFNGNPIEIAAVVVWRVVSPAKACLNVSDYQEFINIQNEAAVRELAG
SYPYDAEDNSESLRNNSTKISSKLRDMLQNRLDLVGVIVEDARISHLAYSSEIAQIMLRRQQAKAITNARGYIVRNAIIM
VDEILKHFELQYQINLSDEQKVKLVNNLLVSLISEQGTQPTINIE
>Mature_285_residues
MNSKEFCDKKLVHINGFSMIFWCIVFILLLLSGIYYGNFFIVLPMSLVSLICTFIIPSGFFVNNPNEAKVVEFFGNYIGT
IFKSGFFWTIPFVRMRSISLKVRNVNTSKIKVNDFNGNPIEIAAVVVWRVVSPAKACLNVSDYQEFINIQNEAAVRELAG
SYPYDAEDNSESLRNNSTKISSKLRDMLQNRLDLVGVIVEDARISHLAYSSEIAQIMLRRQQAKAITNARGYIVRNAIIM
VDEILKHFELQYQINLSDEQKVKLVNNLLVSLISEQGTQPTINIE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32394; Mature: 32394

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKEFCDKKLVHINGFSMIFWCIVFILLLLSGIYYGNFFIVLPMSLVSLICTFIIPSGF
CCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCCCCC
FVNNPNEAKVVEFFGNYIGTIFKSGFFWTIPFVRMRSISLKVRNVNTSKIKVNDFNGNPI
EECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHEEEEEEEECCCCEEEEECCCCCCH
EIAAVVVWRVVSPAKACLNVSDYQEFINIQNEAAVRELAGSYPYDAEDNSESLRNNSTKI
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHCCHHHH
SSKLRDMLQNRLDLVGVIVEDARISHLAYSSEIAQIMLRRQQAKAITNARGYIVRNAIIM
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VDEILKHFELQYQINLSDEQKVKLVNNLLVSLISEQGTQPTINIE
HHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MNSKEFCDKKLVHINGFSMIFWCIVFILLLLSGIYYGNFFIVLPMSLVSLICTFIIPSGF
CCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCCCCC
FVNNPNEAKVVEFFGNYIGTIFKSGFFWTIPFVRMRSISLKVRNVNTSKIKVNDFNGNPI
EECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHEEEEEEEECCCCEEEEECCCCCCH
EIAAVVVWRVVSPAKACLNVSDYQEFINIQNEAAVRELAGSYPYDAEDNSESLRNNSTKI
HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHCCHHHH
SSKLRDMLQNRLDLVGVIVEDARISHLAYSSEIAQIMLRRQQAKAITNARGYIVRNAIIM
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VDEILKHFELQYQINLSDEQKVKLVNNLLVSLISEQGTQPTINIE
HHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA