| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657954
Identifier: 88657954
GI number: 88657954
Start: 1172227
End: 1172784
Strand: Reverse
Name: 88657954
Synonym: ECH_1152
Alternate gene names: NA
Gene position: 1172784-1172227 (Counterclockwise)
Preceding gene: NA
Following gene: 88658195
Centisome position: 99.71
GC content: 30.11
Gene sequence:
>558_bases GTGGGCTTTATTATGAATACAGATTATGATTTTTGTCAGGTTGACTTTTTAATACAACAAAATGGTCATTCTAATATTGA TGTTTATCATGGCAAATTGCACATCAATGCTCAAGGAGATGAGTATTATGCTAGTGGGGATATTGCTAATGATGTAACAG GGGATAAGGGTGTAATTAATATAATAAATCATGGTACAAATGGAGTTTATGGTGATGTATATTGTGGTAAATGTGATTTA CAAATTACTCTTGAACATCATGATCCTGCGACAGATATAAAAAATGTTACATCGATTAATAAAACTTTTCTGATTTCTAT ATTAAGTGGATTTGATGCTTGTTTATTAGTTGATGAACATAATTTGCTATTGACAGATCCATCAAAAGGAGCAGGGGTTA ATGATGAACCTGTTGTAAGTATTCTTCTGCACAATGGTACAGATGCTAATATGATTAGGGATTCTTTTAATAAGGATTAT AAAATTTTTCAAGATGAAGGAAAAACATATAAGTATGTTTATGTTGATCAAGAGAGAATGGCATCTATAGAAAAATAA
Upstream 100 bases:
>100_bases TTGTATTCTAGTATTAATATGTATTAATGCTTTATTGTAAAATAAATATTTATATTAATTTTTTTATAATTGTGGTATAT TGATCTGTAAGTAATATAAT
Downstream 100 bases:
>100_bases ATTTTTATACGAAAAATTTCAAAATGTAAGCTATAGTTGAGATATTAGTTAGATACATAATTTTGTTCTGTGAATACCTC CTATAGCTTGGTATACTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MGFIMNTDYDFCQVDFLIQQNGHSNIDVYHGKLHINAQGDEYYASGDIANDVTGDKGVINIINHGTNGVYGDVYCGKCDL QITLEHHDPATDIKNVTSINKTFLISILSGFDACLLVDEHNLLLTDPSKGAGVNDEPVVSILLHNGTDANMIRDSFNKDY KIFQDEGKTYKYVYVDQERMASIEK
Sequences:
>Translated_185_residues MGFIMNTDYDFCQVDFLIQQNGHSNIDVYHGKLHINAQGDEYYASGDIANDVTGDKGVINIINHGTNGVYGDVYCGKCDL QITLEHHDPATDIKNVTSINKTFLISILSGFDACLLVDEHNLLLTDPSKGAGVNDEPVVSILLHNGTDANMIRDSFNKDY KIFQDEGKTYKYVYVDQERMASIEK >Mature_184_residues GFIMNTDYDFCQVDFLIQQNGHSNIDVYHGKLHINAQGDEYYASGDIANDVTGDKGVINIINHGTNGVYGDVYCGKCDLQ ITLEHHDPATDIKNVTSINKTFLISILSGFDACLLVDEHNLLLTDPSKGAGVNDEPVVSILLHNGTDANMIRDSFNKDYK IFQDEGKTYKYVYVDQERMASIEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20617; Mature: 20486
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIMNTDYDFCQVDFLIQQNGHSNIDVYHGKLHINAQGDEYYASGDIANDVTGDKGVIN CCEEECCCCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCCCCEEE IINHGTNGVYGDVYCGKCDLQITLEHHDPATDIKNVTSINKTFLISILSGFDACLLVDEH EEECCCCCEEECEEECEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHCCCCEEEEEECC NLLLTDPSKGAGVNDEPVVSILLHNGTDANMIRDSFNKDYKIFQDEGKTYKYVYVDQERM CEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCEEEEEEECHHHH ASIEK HCCCC >Mature Secondary Structure GFIMNTDYDFCQVDFLIQQNGHSNIDVYHGKLHINAQGDEYYASGDIANDVTGDKGVIN CEEECCCCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCCCCEEE IINHGTNGVYGDVYCGKCDLQITLEHHDPATDIKNVTSINKTFLISILSGFDACLLVDEH EEECCCCCEEECEEECEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHCCCCEEEEEECC NLLLTDPSKGAGVNDEPVVSILLHNGTDANMIRDSFNKDYKIFQDEGKTYKYVYVDQERM CEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCEEEEEEECHHHH ASIEK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA