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The map label for this gene is atpC

Identifier: 88657939

GI number: 88657939

Start: 584546

End: 584932

Strand: Direct

Name: atpC

Synonym: ECH_0574

Alternate gene names: NA

Gene position: 584546-584932 (Clockwise)

Preceding gene: 88658665

Following gene: 88658176

Centisome position: 49.7

GC content: 27.13

Gene sequence:

>387_bases
ATGAAGTATCTCTCTGTTGAATTTATTACTCCAGATGCTTTTTTAGAGGTAACAAATGTTCTGTCTATTACTTCATATAC
TGTAGATGGAGAATTTGTAATATTACCTGGACATGAAAAATACATTATAGAGCTGCGCTCTGGGATTATTAAACTAAAAG
TTGATACAGGTCTTAGTTTATTTTATATATTAAACCCCATATTAAAGGTTGACTTGTATAATTGTAAAATCTTAGCGAAT
CAATTTATAAATGCTTGTGATGTTAATGCTGTAATACTTAAAAAATATAAACAAGATATAGAGAAGATATTGCATTGTAT
AAGTGATAAAGCATTACTTAAAATGGCACAAATGCAATTGAATTTTATAAATCAAATAGTCAGTTAG

Upstream 100 bases:

>100_bases
GTAAATATGATCACTTGCCTGAAGCTGCATTTTATATGGTTGGTAGTATAGATGATGTCATAAAAAAAGCAGAATTACTT
CAAAAGGAAGGTAAAGTTTA

Downstream 100 bases:

>100_bases
TATGAAAATATTCCTTGATACCATAGATATAGATTTTCTAAAAGAGTTTAGTGTTACTGGTTTGATAGATGGTATTACAA
CTAATCCATTGTTGTTATCA

Product: ATP synthase F1, epsilon subunit

Products: NA

Alternate protein names: ATP Synthase F1 Epsilon Subunit

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKYLSVEFITPDAFLEVTNVLSITSYTVDGEFVILPGHEKYIIELRSGIIKLKVDTGLSLFYILNPILKVDLYNCKILAN
QFINACDVNAVILKKYKQDIEKILHCISDKALLKMAQMQLNFINQIVS

Sequences:

>Translated_128_residues
MKYLSVEFITPDAFLEVTNVLSITSYTVDGEFVILPGHEKYIIELRSGIIKLKVDTGLSLFYILNPILKVDLYNCKILAN
QFINACDVNAVILKKYKQDIEKILHCISDKALLKMAQMQLNFINQIVS
>Mature_128_residues
MKYLSVEFITPDAFLEVTNVLSITSYTVDGEFVILPGHEKYIIELRSGIIKLKVDTGLSLFYILNPILKVDLYNCKILAN
QFINACDVNAVILKKYKQDIEKILHCISDKALLKMAQMQLNFINQIVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14586; Mature: 14586

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLSVEFITPDAFLEVTNVLSITSYTVDGEFVILPGHEKYIIELRSGIIKLKVDTGLSL
CCEEEEEEECCHHHHHHHHHHHEEEEEECCEEEEECCCCCEEEEECCCEEEEEECCCCCH
FYILNPILKVDLYNCKILANQFINACDVNAVILKKYKQDIEKILHCISDKALLKMAQMQL
HHHHHHHHHEEHHHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
NFINQIVS
HHHHHHCC
>Mature Secondary Structure
MKYLSVEFITPDAFLEVTNVLSITSYTVDGEFVILPGHEKYIIELRSGIIKLKVDTGLSL
CCEEEEEEECCHHHHHHHHHHHEEEEEECCEEEEECCCCCEEEEECCCEEEEEECCCCCH
FYILNPILKVDLYNCKILANQFINACDVNAVILKKYKQDIEKILHCISDKALLKMAQMQL
HHHHHHHHHEEHHHHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
NFINQIVS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA