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The map label for this gene is 88657915

Identifier: 88657915

GI number: 88657915

Start: 1108783

End: 1109415

Strand: Reverse

Name: 88657915

Synonym: ECH_1081

Alternate gene names: NA

Gene position: 1109415-1108783 (Counterclockwise)

Preceding gene: 88658280

Following gene: 88658125

Centisome position: 94.32

GC content: 28.28

Gene sequence:

>633_bases
ATGTGGTTAAAACTAATTATTGTTTTTGTCATCCCCTTTTCTATAATGATTTCTCTTGGTACATGGCAAATATTTAGACT
AAAAGAAAAAACCAATATTATCCATGCTATGCAGGTACCATCTACTAAATTATCAGTTCATGATTTAGTAAAACAAAATT
ATAAAAATATAGAAGTAAATGGTACATTTGATAATGATTATAGATTTTTTGTTTTTGCAGGAACATTAGGTTATTATGTA
TTGCAACCTTTTCATTTAAATGATGGTAGATATATATTAGTCAACAAGGGTACAGTGTTAGATAAGACAAGTAAGCTTGA
AATTAACAATACTACTCAACAGAATATTCAAGGAATTTTATATTGTGATAGTAACAAAAAGGTTGGATGGTTTGTAAAAA
ATGACGTTAATGCTAACGTGTGGTTCTGGTTTGATATAGAAAATATGATGAAACACATTAATATACCTTTAGAGAGTTGT
ATAATATGGGCTGGTAATGCAGTAGTGTTTGATGGTATAACAGCTAATGTTCCATTGAAAGTTAGAAATGATCATCTTGA
ATATGTGATTACTTGGTACTTATCAGCGTTGATATGGTTAGTAGGGTATATATACTTATGTCGTTATAAATAA

Upstream 100 bases:

>100_bases
ATAAAATTTTTCTGATAATTTCATAGAATGAAAATTTGTATTTTTGTTATAGTATGAACGTTATAGTCTAATATGTTAGC
GTATTTACAGAATAAATGAT

Downstream 100 bases:

>100_bases
GATGTTAAACTTAATGTAGCAAAAGATAATACAGTTCTGTTATGGATTTATCAGCAAAATATACTGTATTCCTATAGTTT
GTTGTATATTTAATTATAAA

Product: SURF1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MWLKLIIVFVIPFSIMISLGTWQIFRLKEKTNIIHAMQVPSTKLSVHDLVKQNYKNIEVNGTFDNDYRFFVFAGTLGYYV
LQPFHLNDGRYILVNKGTVLDKTSKLEINNTTQQNIQGILYCDSNKKVGWFVKNDVNANVWFWFDIENMMKHINIPLESC
IIWAGNAVVFDGITANVPLKVRNDHLEYVITWYLSALIWLVGYIYLCRYK

Sequences:

>Translated_210_residues
MWLKLIIVFVIPFSIMISLGTWQIFRLKEKTNIIHAMQVPSTKLSVHDLVKQNYKNIEVNGTFDNDYRFFVFAGTLGYYV
LQPFHLNDGRYILVNKGTVLDKTSKLEINNTTQQNIQGILYCDSNKKVGWFVKNDVNANVWFWFDIENMMKHINIPLESC
IIWAGNAVVFDGITANVPLKVRNDHLEYVITWYLSALIWLVGYIYLCRYK
>Mature_210_residues
MWLKLIIVFVIPFSIMISLGTWQIFRLKEKTNIIHAMQVPSTKLSVHDLVKQNYKNIEVNGTFDNDYRFFVFAGTLGYYV
LQPFHLNDGRYILVNKGTVLDKTSKLEINNTTQQNIQGILYCDSNKKVGWFVKNDVNANVWFWFDIENMMKHINIPLESC
IIWAGNAVVFDGITANVPLKVRNDHLEYVITWYLSALIWLVGYIYLCRYK

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 24569; Mature: 24569

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLKLIIVFVIPFSIMISLGTWQIFRLKEKTNIIHAMQVPSTKLSVHDLVKQNYKNIEVN
CHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCEEEEE
GTFDNDYRFFVFAGTLGYYVLQPFHLNDGRYILVNKGTVLDKTSKLEINNTTQQNIQGIL
EEECCCEEEEEEECCCCCCEEEEEEECCCEEEEEECCEEECCCCEEEECCCCHHCCCEEE
YCDSNKKVGWFVKNDVNANVWFWFDIENMMKHINIPLESCIIWAGNAVVFDGITANVPLK
EECCCCEEEEEEECCCCCEEEEEEEHHHHHHHCCCCHHHEEEEECCEEEECCEEECCEEE
VRNDHLEYVITWYLSALIWLVGYIYLCRYK
EECCCHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MWLKLIIVFVIPFSIMISLGTWQIFRLKEKTNIIHAMQVPSTKLSVHDLVKQNYKNIEVN
CHHHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCEEEEE
GTFDNDYRFFVFAGTLGYYVLQPFHLNDGRYILVNKGTVLDKTSKLEINNTTQQNIQGIL
EEECCCEEEEEEECCCCCCEEEEEEECCCEEEEEECCEEECCCCEEEECCCCHHCCCEEE
YCDSNKKVGWFVKNDVNANVWFWFDIENMMKHINIPLESCIIWAGNAVVFDGITANVPLK
EECCCCEEEEEEECCCCCEEEEEEEHHHHHHHCCCCHHHEEEEECCEEEECCEEECCEEE
VRNDHLEYVITWYLSALIWLVGYIYLCRYK
EECCCHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]