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The map label for this gene is p28-2 [H]

Identifier: 88657875

GI number: 88657875

Start: 1166213

End: 1167049

Strand: Reverse

Name: p28-2 [H]

Synonym: ECH_1146

Alternate gene names: 88657875

Gene position: 1167049-1166213 (Counterclockwise)

Preceding gene: 88657568

Following gene: 88658380

Centisome position: 99.22

GC content: 28.08

Gene sequence:

>837_bases
ATGAGATATAGGATTTCAGTAATAATATTGATGTTATTATTGGTACCTTGTTGTTGTTTTTCAGGTTCATTAGATGTATC
AGATTCTTTGAACAGCAGGTTAAAACCTGTTTTTCTAGGGATTTCTTATAAATTGAGTGCTCCTCTGTTTAGTAGTTTTT
CGATAGGTGAAACATATAGGATAAATGGTGTAAAAACTGATAGGGTTGTAGGCTTAAAAAGTGATATTTTATTAGATGCT
GATAAAGCTATGAAAGATTTTAATAACTTCAATTTCTCAGAAGAATATGTTCCAAAATATGACAATAATATTTTTGGATT
GTCTTTTATATTTGGGTATTCATTTAGGAATTTAAGAGTAGAACTTGAAGGATCTTATAAGAAATTTGATGTGATAGATA
CTAGAAATCATTTAGTAGATAATAATTATAGGCACATTGCTTTAGTCAGATCCAATCCACCTACATTGTATGACTATTTT
GTTTTAAAAAATGATGGTGTAGAATTCTATTCAACTATACTAAATATTTGTTACGATTTTGCAGTTGATACTAATATTGT
TCCTTTTTCTTGTGTGGGTATTGGAGAAGATATTATTAAAATTTTTGACTCAATTAGATTTAAACCTTCTTTTAACAGTA
AACTTGGAATCAATTATTTAATGTCTCAGGATATGTTGTTATTTTTTGATGTATATTATCATAGAGTGGTTGGTAATGAG
TATAATAATATTCCTGTGCAATATGTATCCTTACCCAATCCTCTTAATATTTCAACAGCAGCTAAGCTGGATATGGAATA
TTTTGGTGCAGAAATTGGTATAAAGGTATTTGTATAG

Upstream 100 bases:

>100_bases
TCTAATAAAATATGTGCATAAGTAAATTTACCTTTATTATATTATTAATATTTTTACTATATAATTAATAATTATTTATT
GTTACTGGGTAAATTAACTT

Downstream 100 bases:

>100_bases
AATTACCAAAACAGCTGAAATATCTTACATGTAGCTGACTATTGAGAAAGGTAAAATTTCATTCCTGTGTATTACTGTTA
TGCATTTATTATGTAATAAG

Product: major outer membrane protein P28-2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MRYRISVIILMLLLVPCCCFSGSLDVSDSLNSRLKPVFLGISYKLSAPLFSSFSIGETYRINGVKTDRVVGLKSDILLDA
DKAMKDFNNFNFSEEYVPKYDNNIFGLSFIFGYSFRNLRVELEGSYKKFDVIDTRNHLVDNNYRHIALVRSNPPTLYDYF
VLKNDGVEFYSTILNICYDFAVDTNIVPFSCVGIGEDIIKIFDSIRFKPSFNSKLGINYLMSQDMLLFFDVYYHRVVGNE
YNNIPVQYVSLPNPLNISTAAKLDMEYFGAEIGIKVFV

Sequences:

>Translated_278_residues
MRYRISVIILMLLLVPCCCFSGSLDVSDSLNSRLKPVFLGISYKLSAPLFSSFSIGETYRINGVKTDRVVGLKSDILLDA
DKAMKDFNNFNFSEEYVPKYDNNIFGLSFIFGYSFRNLRVELEGSYKKFDVIDTRNHLVDNNYRHIALVRSNPPTLYDYF
VLKNDGVEFYSTILNICYDFAVDTNIVPFSCVGIGEDIIKIFDSIRFKPSFNSKLGINYLMSQDMLLFFDVYYHRVVGNE
YNNIPVQYVSLPNPLNISTAAKLDMEYFGAEIGIKVFV
>Mature_278_residues
MRYRISVIILMLLLVPCCCFSGSLDVSDSLNSRLKPVFLGISYKLSAPLFSSFSIGETYRINGVKTDRVVGLKSDILLDA
DKAMKDFNNFNFSEEYVPKYDNNIFGLSFIFGYSFRNLRVELEGSYKKFDVIDTRNHLVDNNYRHIALVRSNPPTLYDYF
VLKNDGVEFYSTILNICYDFAVDTNIVPFSCVGIGEDIIKIFDSIRFKPSFNSKLGINYLMSQDMLLFFDVYYHRVVGNE
YNNIPVQYVSLPNPLNISTAAKLDMEYFGAEIGIKVFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 31852; Mature: 31852

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRISVIILMLLLVPCCCFSGSLDVSDSLNSRLKPVFLGISYKLSAPLFSSFSIGETYR
CEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEE
INGVKTDRVVGLKSDILLDADKAMKDFNNFNFSEEYVPKYDNNIFGLSFIFGYSFRNLRV
ECCCCCCEEECCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCEEEEHHEECCCEEEEEE
ELEGSYKKFDVIDTRNHLVDNNYRHIALVRSNPPTLYDYFVLKNDGVEFYSTILNICYDF
EEECCCEEEEEEECCCHHCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHH
AVDTNIVPFSCVGIGEDIIKIFDSIRFKPSFNSKLGINYLMSQDMLLFFDVYYHRVVGNE
HCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC
YNNIPVQYVSLPNPLNISTAAKLDMEYFGAEIGIKVFV
CCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MRYRISVIILMLLLVPCCCFSGSLDVSDSLNSRLKPVFLGISYKLSAPLFSSFSIGETYR
CEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEE
INGVKTDRVVGLKSDILLDADKAMKDFNNFNFSEEYVPKYDNNIFGLSFIFGYSFRNLRV
ECCCCCCEEECCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCEEEEHHEECCCEEEEEE
ELEGSYKKFDVIDTRNHLVDNNYRHIALVRSNPPTLYDYFVLKNDGVEFYSTILNICYDF
EEECCCEEEEEEECCCHHCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHH
AVDTNIVPFSCVGIGEDIIKIFDSIRFKPSFNSKLGINYLMSQDMLLFFDVYYHRVVGNE
HCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC
YNNIPVQYVSLPNPLNISTAAKLDMEYFGAEIGIKVFV
CCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]