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The map label for this gene is ydhJ [H]

Identifier: 88657792

GI number: 88657792

Start: 512716

End: 513792

Strand: Direct

Name: ydhJ [H]

Synonym: ECH_0510

Alternate gene names: 88657792

Gene position: 512716-513792 (Clockwise)

Preceding gene: 88657700

Following gene: 88657783

Centisome position: 43.59

GC content: 31.2

Gene sequence:

>1077_bases
GTGTTGCATAAGCTATTAAGAGTAAAGTTACAATATAAAATAGCATTTGTAATTCTATTATTAGCTATTGTGTGGATTAG
TAGTGGAGTATTGAAAAAGTATAATCAGCAAAAAGAAGAAGGTGTTGTTATTCATGATAATTCTCCTAACATTAAGGTAG
TGGAGTCTAATGCTCAAGATAGGGTAGTATATTTATCTTTAACAGGTGAAGTAGAAGCTTTTCGTTATGTTAATATTGTA
CCAGAAGTTGCTGGTAAAGTATCAGATGTATTAGTAAAAGATGGTGAATATGTAACAGAAGGAAATATTTTAGTCAAAAT
AGAAAAATATGAAAAAGAAGAACAATTAAAACAAACTAAAGCTCTATTAAAGCAAAGAGAACTTGAATATAAAGCTTCAC
AGTCTTTAAATGAGCATGGATATAGGTCTGAGATAAATGATGCATTATCTTTTGCTGCTTTGGAATCAGCTAGGGCAGAT
GTGAAAAAAGCACAGATTAGTTTAGAGAGTACGGAGATAAAGGCTCCTTTTTCTGGATTTGTAGATAAGGTGAATGTACA
AGTTGGTGAGTTAGTATCTGCTAGTTCAGGATTATCAGTACTACAATTAGTTAACTTTGATAAAATAAGAGTTGTTACTT
ATGTTCCAGAGAAATATTTAAGCAAGCTAAAGTTAGGTGATGTTTGTAAGGTTTTAATTGCAAAAAATGAGGAGGTAGAT
GCTCCTATTGTTTTTATTAGCAAAATAATAAATCGTAGTACAAGGACTTATCGGATAGAAATGGTACTTGATAATAATGA
TTTAAAAATTTTTACCCAAGGCGCTGTTTATTCTGTAAAAGTTCCTATAGGGAGTTATAGAGCTCATAGAATTTCACCTT
CTGCTTTAGATTTACAAGATGATGGGGATTTGGGAATTAAAGTGATTGTTGATAAAAGAGTAAAGTTTATACCTGTTGAG
GTTATTGATAGTGAAGACAATGGTGATGTTTGGGTAGCTAACTCTCCTGATACTATTCAGTTAATTACTTTAGGTCATGA
GTATGTGAAAGATAATGCGTATATTGGTATAAGGTAA

Upstream 100 bases:

>100_bases
GATATATTCCGCATTTGTCATTCACATCCAGATGTTAATGAAGCATTTAAAGATGCATGTGAAGCAGCATTTTTAAAGTG
ATTTATGAGGTTTAAGTATT

Downstream 100 bases:

>100_bases
TAGGAAATTAGGTTTAATCTGTCATAATTCTGCGGAATTAGTAAATTCAAGCGACTTTATAAGTTAGTATAACTTTTTCA
GTATTATAAAAATTATGTTG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MLHKLLRVKLQYKIAFVILLLAIVWISSGVLKKYNQQKEEGVVIHDNSPNIKVVESNAQDRVVYLSLTGEVEAFRYVNIV
PEVAGKVSDVLVKDGEYVTEGNILVKIEKYEKEEQLKQTKALLKQRELEYKASQSLNEHGYRSEINDALSFAALESARAD
VKKAQISLESTEIKAPFSGFVDKVNVQVGELVSASSGLSVLQLVNFDKIRVVTYVPEKYLSKLKLGDVCKVLIAKNEEVD
APIVFISKIINRSTRTYRIEMVLDNNDLKIFTQGAVYSVKVPIGSYRAHRISPSALDLQDDGDLGIKVIVDKRVKFIPVE
VIDSEDNGDVWVANSPDTIQLITLGHEYVKDNAYIGIR

Sequences:

>Translated_358_residues
MLHKLLRVKLQYKIAFVILLLAIVWISSGVLKKYNQQKEEGVVIHDNSPNIKVVESNAQDRVVYLSLTGEVEAFRYVNIV
PEVAGKVSDVLVKDGEYVTEGNILVKIEKYEKEEQLKQTKALLKQRELEYKASQSLNEHGYRSEINDALSFAALESARAD
VKKAQISLESTEIKAPFSGFVDKVNVQVGELVSASSGLSVLQLVNFDKIRVVTYVPEKYLSKLKLGDVCKVLIAKNEEVD
APIVFISKIINRSTRTYRIEMVLDNNDLKIFTQGAVYSVKVPIGSYRAHRISPSALDLQDDGDLGIKVIVDKRVKFIPVE
VIDSEDNGDVWVANSPDTIQLITLGHEYVKDNAYIGIR
>Mature_358_residues
MLHKLLRVKLQYKIAFVILLLAIVWISSGVLKKYNQQKEEGVVIHDNSPNIKVVESNAQDRVVYLSLTGEVEAFRYVNIV
PEVAGKVSDVLVKDGEYVTEGNILVKIEKYEKEEQLKQTKALLKQRELEYKASQSLNEHGYRSEINDALSFAALESARAD
VKKAQISLESTEIKAPFSGFVDKVNVQVGELVSASSGLSVLQLVNFDKIRVVTYVPEKYLSKLKLGDVCKVLIAKNEEVD
APIVFISKIINRSTRTYRIEMVLDNNDLKIFTQGAVYSVKVPIGSYRAHRISPSALDLQDDGDLGIKVIVDKRVKFIPVE
VIDSEDNGDVWVANSPDTIQLITLGHEYVKDNAYIGIR

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=188, Percent_Identity=25.531914893617, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 40125; Mature: 40125

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHKLLRVKLQYKIAFVILLLAIVWISSGVLKKYNQQKEEGVVIHDNSPNIKVVESNAQD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCEEEECCCCCEEEEECCCCC
RVVYLSLTGEVEAFRYVNIVPEVAGKVSDVLVKDGEYVTEGNILVKIEKYEKEEQLKQTK
EEEEEEECCCEEEEEEEEECHHHHCCHHHEEEECCCEEECCCEEEEEECCCHHHHHHHHH
ALLKQRELEYKASQSLNEHGYRSEINDALSFAALESARADVKKAQISLESTEIKAPFSGF
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEECCCHHHH
VDKVNVQVGELVSASSGLSVLQLVNFDKIRVVTYVPEKYLSKLKLGDVCKVLIAKNEEVD
HEEECEEHHHHHCCCCCCCEEECCCCCEEEEEEECCHHHHHHCCCCHHHEEEEECCCCCC
APIVFISKIINRSTRTYRIEMVLDNNDLKIFTQGAVYSVKVPIGSYRAHRISPSALDLQD
CHHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCEEEEEECCCCCEEEECCCCEECCCC
DGDLGIKVIVDKRVKFIPVEVIDSEDNGDVWVANSPDTIQLITLGHEYVKDNAYIGIR
CCCCEEEEEEECCEEEEEEEEEECCCCCCEEEECCCCEEEEEEECHHHHCCCEEEECC
>Mature Secondary Structure
MLHKLLRVKLQYKIAFVILLLAIVWISSGVLKKYNQQKEEGVVIHDNSPNIKVVESNAQD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCEEEECCCCCEEEEECCCCC
RVVYLSLTGEVEAFRYVNIVPEVAGKVSDVLVKDGEYVTEGNILVKIEKYEKEEQLKQTK
EEEEEEECCCEEEEEEEEECHHHHCCHHHEEEECCCEEECCCEEEEEECCCHHHHHHHHH
ALLKQRELEYKASQSLNEHGYRSEINDALSFAALESARADVKKAQISLESTEIKAPFSGF
HHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEECCCHHHH
VDKVNVQVGELVSASSGLSVLQLVNFDKIRVVTYVPEKYLSKLKLGDVCKVLIAKNEEVD
HEEECEEHHHHHCCCCCCCEEECCCCCEEEEEEECCHHHHHHCCCCHHHEEEEECCCCCC
APIVFISKIINRSTRTYRIEMVLDNNDLKIFTQGAVYSVKVPIGSYRAHRISPSALDLQD
CHHHHHHHHHCCCCEEEEEEEEEECCCEEEEECCCEEEEEECCCCCEEEECCCCEECCCC
DGDLGIKVIVDKRVKFIPVEVIDSEDNGDVWVANSPDTIQLITLGHEYVKDNAYIGIR
CCCCEEEEEEECCEEEEEEEEEECCCCCCEEEECCCCEEEEEEECHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]