| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657760
Identifier: 88657760
GI number: 88657760
Start: 770866
End: 771873
Strand: Reverse
Name: 88657760
Synonym: ECH_0762
Alternate gene names: NA
Gene position: 771873-770866 (Counterclockwise)
Preceding gene: 88658048
Following gene: 88658374
Centisome position: 65.62
GC content: 30.65
Gene sequence:
>1008_bases ATGCATTCTTACTTAAAAAAAATTATATTTGATTGTGGAGGTGCTATTTCAGTAGAACAGTTTATGAGAATTGCCCTTTA TGATGTACATTACGGCTATTATATGACACAAATGCCTTTTGGTACTTATGGGGATTTTATTACTGCTCCTGATATATCTC AATTGTTTGGAGAAGTTATTGCATTATGGATATTGTTAAATTGGCAAAAAATGGGGTCTCCATCTAAATTTATTATAGTA GAATTGGGGCCTGGTAGAGGAACATTAATAAGTGATGTTGTTAGAGTTTTGAGAAAATTCGAACAATGTTACGCAGCAAT GGTTGTTTATCTTGTTGAAATAAGCCCTATATTAGAAAAATTGCAGCGAGATGTTTTAAAAGATGAAAAAGTGTTCTGGT GTAAAGATATAAAGGATTTACCAGATTATCCTGTATTAATTATAGCTAATGAGTTTTTTGATGCTTTGCCTGTTAAACAG TTTGTGTATACCAATGATTCTTGGTGTGAAACATATGTTACAGTAGAGAACGATGAATTTAAAATTGCCTATAAAAAAGT AAATAAGATCTTTGAAATGTCAAATGACATGAAAAATCCAGTAATAGAGATATGTGATGAAGCTGTTTCTATAGTAAAAT GTATGGAAAATAAGATTCTACAAAGTGGTGGTGCAGCAGTGGTTATTGATTATGGATATATAGATTGTCCATATAAAAGT ACTATACAGTCTGTCAAGAATCATCAGTATAATAATTTACTTAAGAATGTGGGAGAAAGTGATATAACTGCATATGTGAA TTTTGCTGTATTACATAACAGTTTGTCTACTCTCAGTTCAGTGATTATGACGCAAAGGGATTTTTTATATAATTTTGGTA TTAAAGAAAGGCTGCAAGTACTGATTGCAAATGCTACGGAGCTTCAAAAACAAAATTTAATAGCAGGTTTTTTGAGATTG ACTGAAAATATGGGTAGTATGTTTAAAGTATTTTTGGTAAATCCATAG
Upstream 100 bases:
>100_bases CTTAATTGTTTATTGAAAATAGATAACATCATAATATTAAAAATTTACAACCCATTTTACTATTTATATCATATTAACGT AAATAATACATTAATTAATT
Downstream 100 bases:
>100_bases TTGAACTATAATTAATAAAATATTGTTAATCATGTTTTTTTACAATGATATAAGTGTATTTTATGTTCTGTTTAAAGTTT TATCTAACTACTACTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MHSYLKKIIFDCGGAISVEQFMRIALYDVHYGYYMTQMPFGTYGDFITAPDISQLFGEVIALWILLNWQKMGSPSKFIIV ELGPGRGTLISDVVRVLRKFEQCYAAMVVYLVEISPILEKLQRDVLKDEKVFWCKDIKDLPDYPVLIIANEFFDALPVKQ FVYTNDSWCETYVTVENDEFKIAYKKVNKIFEMSNDMKNPVIEICDEAVSIVKCMENKILQSGGAAVVIDYGYIDCPYKS TIQSVKNHQYNNLLKNVGESDITAYVNFAVLHNSLSTLSSVIMTQRDFLYNFGIKERLQVLIANATELQKQNLIAGFLRL TENMGSMFKVFLVNP
Sequences:
>Translated_335_residues MHSYLKKIIFDCGGAISVEQFMRIALYDVHYGYYMTQMPFGTYGDFITAPDISQLFGEVIALWILLNWQKMGSPSKFIIV ELGPGRGTLISDVVRVLRKFEQCYAAMVVYLVEISPILEKLQRDVLKDEKVFWCKDIKDLPDYPVLIIANEFFDALPVKQ FVYTNDSWCETYVTVENDEFKIAYKKVNKIFEMSNDMKNPVIEICDEAVSIVKCMENKILQSGGAAVVIDYGYIDCPYKS TIQSVKNHQYNNLLKNVGESDITAYVNFAVLHNSLSTLSSVIMTQRDFLYNFGIKERLQVLIANATELQKQNLIAGFLRL TENMGSMFKVFLVNP >Mature_335_residues MHSYLKKIIFDCGGAISVEQFMRIALYDVHYGYYMTQMPFGTYGDFITAPDISQLFGEVIALWILLNWQKMGSPSKFIIV ELGPGRGTLISDVVRVLRKFEQCYAAMVVYLVEISPILEKLQRDVLKDEKVFWCKDIKDLPDYPVLIIANEFFDALPVKQ FVYTNDSWCETYVTVENDEFKIAYKKVNKIFEMSNDMKNPVIEICDEAVSIVKCMENKILQSGGAAVVIDYGYIDCPYKS TIQSVKNHQYNNLLKNVGESDITAYVNFAVLHNSLSTLSSVIMTQRDFLYNFGIKERLQVLIANATELQKQNLIAGFLRL TENMGSMFKVFLVNP
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=358, Percent_Identity=31.8435754189944, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI145701028, Length=292, Percent_Identity=25, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI193211224, Length=372, Percent_Identity=31.4516129032258, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24645885, Length=360, Percent_Identity=32.2222222222222, Blast_Score=190, Evalue=9e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38347; Mature: 38347
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS01295 ISPD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSYLKKIIFDCGGAISVEQFMRIALYDVHYGYYMTQMPFGTYGDFITAPDISQLFGEVI CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHH ALWILLNWQKMGSPSKFIIVELGPGRGTLISDVVRVLRKFEQCYAAMVVYLVEISPILEK HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQRDVLKDEKVFWCKDIKDLPDYPVLIIANEFFDALPVKQFVYTNDSWCETYVTVENDEF HHHHHHCCCCEEEECCCCCCCCCCEEEEECHHHHHCCHHHHEECCCCCEEEEEEEECCCE KIAYKKVNKIFEMSNDMKNPVIEICDEAVSIVKCMENKILQSGGAAVVIDYGYIDCPYKS EHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH TIQSVKNHQYNNLLKNVGESDITAYVNFAVLHNSLSTLSSVIMTQRDFLYNFGIKERLQV HHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LIANATELQKQNLIAGFLRLTENMGSMFKVFLVNP HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC >Mature Secondary Structure MHSYLKKIIFDCGGAISVEQFMRIALYDVHYGYYMTQMPFGTYGDFITAPDISQLFGEVI CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHH ALWILLNWQKMGSPSKFIIVELGPGRGTLISDVVRVLRKFEQCYAAMVVYLVEISPILEK HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQRDVLKDEKVFWCKDIKDLPDYPVLIIANEFFDALPVKQFVYTNDSWCETYVTVENDEF HHHHHHCCCCEEEECCCCCCCCCCEEEEECHHHHHCCHHHHEECCCCCEEEEEEEECCCE KIAYKKVNKIFEMSNDMKNPVIEICDEAVSIVKCMENKILQSGGAAVVIDYGYIDCPYKS EHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH TIQSVKNHQYNNLLKNVGESDITAYVNFAVLHNSLSTLSSVIMTQRDFLYNFGIKERLQV HHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LIANATELQKQNLIAGFLRLTENMGSMFKVFLVNP HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA