| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
Click here to switch to the map view.
The map label for this gene is 88657720
Identifier: 88657720
GI number: 88657720
Start: 373782
End: 374837
Strand: Direct
Name: 88657720
Synonym: ECH_0379
Alternate gene names: NA
Gene position: 373782-374837 (Clockwise)
Preceding gene: 88657615
Following gene: 88658349
Centisome position: 31.78
GC content: 30.21
Gene sequence:
>1056_bases ATGATAATAAAGTTTGGGGTTGAAAATCTGATCGATAGTGCTGTGGAAATAGTTTGTAAATATTTTGATATATATCAGCG AAATGATGCAGTAAAACATGTATTACATAAATGTATTAAAAGTTTAAGAACTGTAGAAAAGAAATTAAAGATATATAGAG GGAAAGAAGCTAAAGGACATGTAATTAGTGATAGCCAATTTGCTGAAATGGAGGATCTAATAAAAAAAGTTCTCATGAAG GTGTTTGAGATTGATATTTCTTATCAAAAACAACACTTGTCTGCAGAAAAAATGGAGGAGTATAAAGTAGCTGTTAGTCT TTTATTGGATCAAATAGTAAGGTGTAAGTCTTATGCTCTTAAAGAAAGTGATATTCTTCCTAAGGTTGTAGGGAATGCAA CCTTAAAACGTAGTGCATATAAGTGTAAGCATGTAGTGGATTTTATTAATAAGAATAGATTTCTTCCTATGAATATGGGG AGATTTGATAAGCTTTGTTTTGATCTAGATTTAGATCCTCAGATTTTGAAACAAGTTATAGATTTATGCAGTTTTGCTCT TATATTTGAAATTTTGGATCTTAAGTTAGTACAATTTCTTGTTGAAATGAGATTCTTTCCACATCAAAACACTAATGTAA TTAGTATAACTAAAGATAATTACATAGAATTAATGCAGCATATTATGCTTTATAAATGTTCTCAGTCTATTGGCAAAGAG TATACTAATGAGCAAGCAAGGTACTTACCTTGTTTTTCACCTGGTTATACTCGGGGTAATGTTAAGGGCAATTCATTCAT ATGTTTAGGAATAGCTTTGTTTATAGCACAAGCTCTATTTAATGGATTTGGGTTATTATTTATGTTGCTGTCTGAATTTA AGACACAAAATGATTGGTGGTTTATTGGCATATGTGTTGTTAATATGCTCTTAGCCGTTACTGCTCTTACGTTGATTTGT ATTGGAAAGAAACAACTGAGTCAAAATCATGATACCTTATTAACGGATATAGATGTCAGTGGTATTAATATTGTTGAAGA AAGTGTAGATTTATAG
Upstream 100 bases:
>100_bases TGACATTTATAGAAAATGTTATTTTTACAACTCTTAGTTGTATAGTATAAAAATTATTATACTATACTAATTTAATAATA AATAGGTAAGTAAGATGGCT
Downstream 100 bases:
>100_bases TTTTTTATTTGTATGTCATTTGTATTAGATATAGCTGATAAAAATGCAATTTATATTGTAACATGATTATTAAGTTTGAT GATTTATTTTATTATAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MIIKFGVENLIDSAVEIVCKYFDIYQRNDAVKHVLHKCIKSLRTVEKKLKIYRGKEAKGHVISDSQFAEMEDLIKKVLMK VFEIDISYQKQHLSAEKMEEYKVAVSLLLDQIVRCKSYALKESDILPKVVGNATLKRSAYKCKHVVDFINKNRFLPMNMG RFDKLCFDLDLDPQILKQVIDLCSFALIFEILDLKLVQFLVEMRFFPHQNTNVISITKDNYIELMQHIMLYKCSQSIGKE YTNEQARYLPCFSPGYTRGNVKGNSFICLGIALFIAQALFNGFGLLFMLLSEFKTQNDWWFIGICVVNMLLAVTALTLIC IGKKQLSQNHDTLLTDIDVSGINIVEESVDL
Sequences:
>Translated_351_residues MIIKFGVENLIDSAVEIVCKYFDIYQRNDAVKHVLHKCIKSLRTVEKKLKIYRGKEAKGHVISDSQFAEMEDLIKKVLMK VFEIDISYQKQHLSAEKMEEYKVAVSLLLDQIVRCKSYALKESDILPKVVGNATLKRSAYKCKHVVDFINKNRFLPMNMG RFDKLCFDLDLDPQILKQVIDLCSFALIFEILDLKLVQFLVEMRFFPHQNTNVISITKDNYIELMQHIMLYKCSQSIGKE YTNEQARYLPCFSPGYTRGNVKGNSFICLGIALFIAQALFNGFGLLFMLLSEFKTQNDWWFIGICVVNMLLAVTALTLIC IGKKQLSQNHDTLLTDIDVSGINIVEESVDL >Mature_351_residues MIIKFGVENLIDSAVEIVCKYFDIYQRNDAVKHVLHKCIKSLRTVEKKLKIYRGKEAKGHVISDSQFAEMEDLIKKVLMK VFEIDISYQKQHLSAEKMEEYKVAVSLLLDQIVRCKSYALKESDILPKVVGNATLKRSAYKCKHVVDFINKNRFLPMNMG RFDKLCFDLDLDPQILKQVIDLCSFALIFEILDLKLVQFLVEMRFFPHQNTNVISITKDNYIELMQHIMLYKCSQSIGKE YTNEQARYLPCFSPGYTRGNVKGNSFICLGIALFIAQALFNGFGLLFMLLSEFKTQNDWWFIGICVVNMLLAVTALTLIC IGKKQLSQNHDTLLTDIDVSGINIVEESVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40359; Mature: 40359
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKFGVENLIDSAVEIVCKYFDIYQRNDAVKHVLHKCIKSLRTVEKKLKIYRGKEAKGH CEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VISDSQFAEMEDLIKKVLMKVFEIDISYQKQHLSAEKMEEYKVAVSLLLDQIVRCKSYAL EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH KESDILPKVVGNATLKRSAYKCKHVVDFINKNRFLPMNMGRFDKLCFDLDLDPQILKQVI CHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHH DLCSFALIFEILDLKLVQFLVEMRFFPHQNTNVISITKDNYIELMQHIMLYKCSQSIGKE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH YTNEQARYLPCFSPGYTRGNVKGNSFICLGIALFIAQALFNGFGLLFMLLSEFKTQNDWW HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE FIGICVVNMLLAVTALTLICIGKKQLSQNHDTLLTDIDVSGINIVEESVDL EHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCHHHHHHCCC >Mature Secondary Structure MIIKFGVENLIDSAVEIVCKYFDIYQRNDAVKHVLHKCIKSLRTVEKKLKIYRGKEAKGH CEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VISDSQFAEMEDLIKKVLMKVFEIDISYQKQHLSAEKMEEYKVAVSLLLDQIVRCKSYAL EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH KESDILPKVVGNATLKRSAYKCKHVVDFINKNRFLPMNMGRFDKLCFDLDLDPQILKQVI CHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHH DLCSFALIFEILDLKLVQFLVEMRFFPHQNTNVISITKDNYIELMQHIMLYKCSQSIGKE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH YTNEQARYLPCFSPGYTRGNVKGNSFICLGIALFIAQALFNGFGLLFMLLSEFKTQNDWW HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE FIGICVVNMLLAVTALTLICIGKKQLSQNHDTLLTDIDVSGINIVEESVDL EHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA