Definition Ehrlichia chaffeensis str. Arkansas, complete genome.
Accession NC_007799
Length 1,176,248

Click here to switch to the map view.

The map label for this gene is 88657659

Identifier: 88657659

GI number: 88657659

Start: 103958

End: 104566

Strand: Direct

Name: 88657659

Synonym: ECH_0117

Alternate gene names: NA

Gene position: 103958-104566 (Clockwise)

Preceding gene: 88658018

Following gene: 88657912

Centisome position: 8.84

GC content: 39.24

Gene sequence:

>609_bases
ATGGGTGATAATGAAGCTGCAAAAGAGTCACCTCGTAAAAAGAAAAAGTCGAAAAATAAAAAAACAGGTAGTCCGTTAAA
ACAAGTAGAAACTAGAACAATAACTATTGAAAGCAAGCAGAGTGTTGATACTGAAGAACGAACGGGACTGTTATCAGAGC
AACTTTCTAATGTGCACCTTGAATCTTGTGATCAGGATATTGTAAAAGCGAAAGGTCAGGATGTACAACATCTTACTGAA
AAAAAAGACGGGGAAACATCTCATGTTTTATTGGGAGGTACAATCAAACCACGTAGTCGACGCTCTGGGAAATTAACATT
AAGAAATATGGGGAGTGCTAGTTTTACTACTCAATCGGTAAGTGATGCTGCAAAGGTTAGTGGTGCATCTAATGTTGGTC
ATGTAGAAGGTGCTTCTTGTATTCCAGACCAGAGCAGCGCTACTGTAGGCATGCAAAGTTTAGAAAGTAAGTATTTAAAA
GAAGGTGCAAAGCCAAAAGTTCGTGTAGGACGAACTGTTGAGCAATCAGTGAGTTATGCTAAAAAAGCTAGTACTGGAAT
ACCTATTGTTAAAAAAGATGTGAAAGAAGGGGGGGGGGGGGAGTGTTAG

Upstream 100 bases:

>100_bases
GAAGATTTAAATCTTTTTTGATTTCATTACATCGAATAAGTGTGTTTTTATGCTAATTTCTGTAGTTACTGCGGTTGTTA
TTCCTATAGTAATAATGTTA

Downstream 100 bases:

>100_bases
TCAAGAAACTACTGTTGTAGTTCCTGTTGGTAGTGTTACAAAAGCTGGTCCGACTGTTTGCCCAGTAAGTGATGCTGAGA
AATCTGTAACTAAGAGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHLESCDQDIVKAKGQDVQHLTE
KKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLK
EGAKPKVRVGRTVEQSVSYAKKASTGIPIVKKDVKEGGGGEC

Sequences:

>Translated_202_residues
MGDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHLESCDQDIVKAKGQDVQHLTE
KKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLK
EGAKPKVRVGRTVEQSVSYAKKASTGIPIVKKDVKEGGGGEC
>Mature_201_residues
GDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHLESCDQDIVKAKGQDVQHLTEK
KDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLKE
GAKPKVRVGRTVEQSVSYAKKASTGIPIVKKDVKEGGGGEC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21540; Mature: 21409

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHL
CCCCHHHHHCHHHHHHHCCCCCCCHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCH
ESCDQDIVKAKGQDVQHLTEKKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSV
HHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHH
SDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLKEGAKPKVRVGRTVEQSVSYA
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHH
KKASTGIPIVKKDVKEGGGGEC
HHHCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
GDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHL
CCCHHHHHCHHHHHHHCCCCCCCHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCH
ESCDQDIVKAKGQDVQHLTEKKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSV
HHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHH
SDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLKEGAKPKVRVGRTVEQSVSYA
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHH
KKASTGIPIVKKDVKEGGGGEC
HHHCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA