| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657659
Identifier: 88657659
GI number: 88657659
Start: 103958
End: 104566
Strand: Direct
Name: 88657659
Synonym: ECH_0117
Alternate gene names: NA
Gene position: 103958-104566 (Clockwise)
Preceding gene: 88658018
Following gene: 88657912
Centisome position: 8.84
GC content: 39.24
Gene sequence:
>609_bases ATGGGTGATAATGAAGCTGCAAAAGAGTCACCTCGTAAAAAGAAAAAGTCGAAAAATAAAAAAACAGGTAGTCCGTTAAA ACAAGTAGAAACTAGAACAATAACTATTGAAAGCAAGCAGAGTGTTGATACTGAAGAACGAACGGGACTGTTATCAGAGC AACTTTCTAATGTGCACCTTGAATCTTGTGATCAGGATATTGTAAAAGCGAAAGGTCAGGATGTACAACATCTTACTGAA AAAAAAGACGGGGAAACATCTCATGTTTTATTGGGAGGTACAATCAAACCACGTAGTCGACGCTCTGGGAAATTAACATT AAGAAATATGGGGAGTGCTAGTTTTACTACTCAATCGGTAAGTGATGCTGCAAAGGTTAGTGGTGCATCTAATGTTGGTC ATGTAGAAGGTGCTTCTTGTATTCCAGACCAGAGCAGCGCTACTGTAGGCATGCAAAGTTTAGAAAGTAAGTATTTAAAA GAAGGTGCAAAGCCAAAAGTTCGTGTAGGACGAACTGTTGAGCAATCAGTGAGTTATGCTAAAAAAGCTAGTACTGGAAT ACCTATTGTTAAAAAAGATGTGAAAGAAGGGGGGGGGGGGGAGTGTTAG
Upstream 100 bases:
>100_bases GAAGATTTAAATCTTTTTTGATTTCATTACATCGAATAAGTGTGTTTTTATGCTAATTTCTGTAGTTACTGCGGTTGTTA TTCCTATAGTAATAATGTTA
Downstream 100 bases:
>100_bases TCAAGAAACTACTGTTGTAGTTCCTGTTGGTAGTGTTACAAAAGCTGGTCCGACTGTTTGCCCAGTAAGTGATGCTGAGA AATCTGTAACTAAGAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHLESCDQDIVKAKGQDVQHLTE KKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLK EGAKPKVRVGRTVEQSVSYAKKASTGIPIVKKDVKEGGGGEC
Sequences:
>Translated_202_residues MGDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHLESCDQDIVKAKGQDVQHLTE KKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLK EGAKPKVRVGRTVEQSVSYAKKASTGIPIVKKDVKEGGGGEC >Mature_201_residues GDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHLESCDQDIVKAKGQDVQHLTEK KDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLKE GAKPKVRVGRTVEQSVSYAKKASTGIPIVKKDVKEGGGGEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21540; Mature: 21409
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHL CCCCHHHHHCHHHHHHHCCCCCCCHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCH ESCDQDIVKAKGQDVQHLTEKKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSV HHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHH SDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLKEGAKPKVRVGRTVEQSVSYA HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHH KKASTGIPIVKKDVKEGGGGEC HHHCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure GDNEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSVDTEERTGLLSEQLSNVHL CCCHHHHHCHHHHHHHCCCCCCCHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHCCH ESCDQDIVKAKGQDVQHLTEKKDGETSHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSV HHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHH SDAAKVSGASNVGHVEGASCIPDQSSATVGMQSLESKYLKEGAKPKVRVGRTVEQSVSYA HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHH KKASTGIPIVKKDVKEGGGGEC HHHCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA