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The map label for this gene is petC [H]

Identifier: 88657654

GI number: 88657654

Start: 521631

End: 522389

Strand: Direct

Name: petC [H]

Synonym: ECH_0522

Alternate gene names: 88657654

Gene position: 521631-522389 (Clockwise)

Preceding gene: 88658641

Following gene: 88658285

Centisome position: 44.35

GC content: 32.15

Gene sequence:

>759_bases
ATGATATTAATGCGGTTTCTTCTTATAGTTTATTTTGTTTGTGTGTCATTTGTATGTGCTGCAGAAGAATTTAAACATCT
ATCTCCTAAGAAAATTAATTGGAAATTCGATGGTATATTAGGTTCATTTGATAAACAGTCTATACAGCGTGGTTATCAGG
TGTATAGAGAAGTATGTTCATCTTGTCATTCTATGAAAAGAATAGCATTTCGTAATTTACGTGATGTAGGATTTTCTGAA
GAAGAAGTAAAAGCTATTGCAGCATCATATCAGGTTTTAGATGGACCAAATGATATTGGTGAAATGTTTGAACGTCCAGG
AATTAAATCAGATTACTTTATTCCTCCTTTTCCTAATAAAGAAGCTGCTATGGCTGCTAATAAAGGTGCATTTCCACCTG
ATTTGTCTTTGATAATTAAAGCGAGACATAATGGTGCTAATTATTTATATTCTTTATTAACTGGCTATGAAAGTCATGAT
CCTGATGAAAGTGGATTATATACTAATCCTTATTTTACTACTGGAAAAATGTCTATGGCTCCTCCACTGTCTGATGGTTT
GGTACAATACACAGATGGTACAGATTCTAAAGTGGAGAATATGGCTTATGATGTAGTTAATTTTTTACAGTGGGCAGCTG
AGCCTGAGATGGAAACCCGTAAAAAATTAGGAATCAAGGTTATTAGTTTCTTATTAGTGTTGACAATTTTTGTAATACTC
GCAAATAAAAGATTATGGAAAGATCTTTATAAGAAATAA

Upstream 100 bases:

>100_bases
ATTTCTCATATTTTTTTATTGTGTTGCCTATATTGTCTAAGTATGAAAAGCCAGTTGTGCTTCCAAAAACGATAAGTGAT
GCAGTGCCGGAGATGAAATA

Downstream 100 bases:

>100_bases
ATGTACTTTTATAACATTTTTCTAATGAAGTGTTTTTTTTGCTAATGTTCTGATCTTATAATGATTGATTTAGACAGTTA
CATGTTAATTATGTAGATGA

Product: ubiquinol-cytochrome c reductase, cytochrome c1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MILMRFLLIVYFVCVSFVCAAEEFKHLSPKKINWKFDGILGSFDKQSIQRGYQVYREVCSSCHSMKRIAFRNLRDVGFSE
EEVKAIAASYQVLDGPNDIGEMFERPGIKSDYFIPPFPNKEAAMAANKGAFPPDLSLIIKARHNGANYLYSLLTGYESHD
PDESGLYTNPYFTTGKMSMAPPLSDGLVQYTDGTDSKVENMAYDVVNFLQWAAEPEMETRKKLGIKVISFLLVLTIFVIL
ANKRLWKDLYKK

Sequences:

>Translated_252_residues
MILMRFLLIVYFVCVSFVCAAEEFKHLSPKKINWKFDGILGSFDKQSIQRGYQVYREVCSSCHSMKRIAFRNLRDVGFSE
EEVKAIAASYQVLDGPNDIGEMFERPGIKSDYFIPPFPNKEAAMAANKGAFPPDLSLIIKARHNGANYLYSLLTGYESHD
PDESGLYTNPYFTTGKMSMAPPLSDGLVQYTDGTDSKVENMAYDVVNFLQWAAEPEMETRKKLGIKVISFLLVLTIFVIL
ANKRLWKDLYKK
>Mature_252_residues
MILMRFLLIVYFVCVSFVCAAEEFKHLSPKKINWKFDGILGSFDKQSIQRGYQVYREVCSSCHSMKRIAFRNLRDVGFSE
EEVKAIAASYQVLDGPNDIGEMFERPGIKSDYFIPPFPNKEAAMAANKGAFPPDLSLIIKARHNGANYLYSLLTGYESHD
PDESGLYTNPYFTTGKMSMAPPLSDGLVQYTDGTDSKVENMAYDVVNFLQWAAEPEMETRKKLGIKVISFLLVLTIFVIL
ANKRLWKDLYKK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21359867, Length=199, Percent_Identity=50.251256281407, Blast_Score=210, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI17506225, Length=224, Percent_Identity=41.5178571428571, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6324639, Length=252, Percent_Identity=43.6507936507937, Blast_Score=213, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24658292, Length=227, Percent_Identity=47.5770925110132, Blast_Score=205, Evalue=2e-53,
Organism=Drosophila melanogaster, GI21358225, Length=240, Percent_Identity=42.9166666666667, Blast_Score=181, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: NA

Molecular weight: Translated: 28665; Mature: 28665

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILMRFLLIVYFVCVSFVCAAEEFKHLSPKKINWKFDGILGSFDKQSIQRGYQVYREVCS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHH
SCHSMKRIAFRNLRDVGFSEEEVKAIAASYQVLDGPNDIGEMFERPGIKSDYFIPPFPNK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
EAAMAANKGAFPPDLSLIIKARHNGANYLYSLLTGYESHDPDESGLYTNPYFTTGKMSMA
HHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCC
PPLSDGLVQYTDGTDSKVENMAYDVVNFLQWAAEPEMETRKKLGIKVISFLLVLTIFVIL
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ANKRLWKDLYKK
HCHHHHHHHHCC
>Mature Secondary Structure
MILMRFLLIVYFVCVSFVCAAEEFKHLSPKKINWKFDGILGSFDKQSIQRGYQVYREVCS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHCCCHHHHHHHHHHHHHHHHH
SCHSMKRIAFRNLRDVGFSEEEVKAIAASYQVLDGPNDIGEMFERPGIKSDYFIPPFPNK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
EAAMAANKGAFPPDLSLIIKARHNGANYLYSLLTGYESHDPDESGLYTNPYFTTGKMSMA
HHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCC
PPLSDGLVQYTDGTDSKVENMAYDVVNFLQWAAEPEMETRKKLGIKVISFLLVLTIFVIL
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ANKRLWKDLYKK
HCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]