| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
Click here to switch to the map view.
The map label for this gene is 88657633
Identifier: 88657633
GI number: 88657633
Start: 106236
End: 106877
Strand: Direct
Name: 88657633
Synonym: ECH_0120
Alternate gene names: NA
Gene position: 106236-106877 (Clockwise)
Preceding gene: 88658284
Following gene: 88658059
Centisome position: 9.03
GC content: 36.92
Gene sequence:
>642_bases ATGTTAATGAGTGGTGATGAAGCTGCAAAAGAGTCACCTCGTAAAAAGAAAAAGTCGAAAAATAAAAAAACAGGTAGTCC ATTAAAACAAGTAGAAACTAGAACAATAACTATTGAAAGCAAGCAGAGTATTGATACTGAAGAACGAACGGGACTGTTAT CAGAGCAACTTTCTAGTATGCACCTTGAATCTTGTGATCAGGATATTGTAAAAGCGAAAGGTCAGGATGTACAACATCTG ACTGAAAAAAAAGACGGGGGAATATCTCATGTTTTATTGGGAGGTACAATCAAACCACGTAGTCGACGCTCTGGGAAATT AACATTAAGAAATATGGGGAGTGCTAGTTTTACTACTCAATCAGTAAGTTATGCTGCAAAGGTTAGTGGTACATATAATG TTGGTCATGTAGAAGGTGCTTCTTGTATGCTAGATCGTGAAAGCACTACTGTAGACACACAAAATTTGGAAAGTAAGTAT TTAAAAGAAGGTGCAAAGCCAAAAGTTCGTGTAGGACAAACTGTTGAACAATCAGTGAGTTATGCTAAAAAAGCTAGTAC TGGAATACCTATTGTTAAAAAAGATGTGAAAGAAGGGGGGGGGGGGAGAGGAATGTTAGTCAAGAAAAAACTACTGTTGT AA
Upstream 100 bases:
>100_bases TAGAGAATTTAAATCTTTTTTAATTTGCATTACATCGAATAAGTGTGTCTTTATGCTAATTTCTGTAGTTGCTGCGGTTG TTATTCCTGCAGTAACATTA
Downstream 100 bases:
>100_bases TTCCTGTTGGTAATGTTACAAAAGCTGGTTCAACTGTTTACCCAGTAAGTTATGCTGAAAAAGCTAGAACTAAGATATCT TCTGTTAAAGAGGGTGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MLMSGDEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSIDTEERTGLLSEQLSSMHLESCDQDIVKAKGQDVQHL TEKKDGGISHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSYAAKVSGTYNVGHVEGASCMLDRESTTVDTQNLESKY LKEGAKPKVRVGQTVEQSVSYAKKASTGIPIVKKDVKEGGGGRGMLVKKKLLL
Sequences:
>Translated_213_residues MLMSGDEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSIDTEERTGLLSEQLSSMHLESCDQDIVKAKGQDVQHL TEKKDGGISHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSYAAKVSGTYNVGHVEGASCMLDRESTTVDTQNLESKY LKEGAKPKVRVGQTVEQSVSYAKKASTGIPIVKKDVKEGGGGRGMLVKKKLLL >Mature_213_residues MLMSGDEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSIDTEERTGLLSEQLSSMHLESCDQDIVKAKGQDVQHL TEKKDGGISHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQSVSYAAKVSGTYNVGHVEGASCMLDRESTTVDTQNLESKY LKEGAKPKVRVGQTVEQSVSYAKKASTGIPIVKKDVKEGGGGRGMLVKKKLLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23081; Mature: 23081
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSGDEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSIDTEERTGLLSEQLSSM CCCCCCHHHHCCHHHHHHHCCCCCCCHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHH HLESCDQDIVKAKGQDVQHLTEKKDGGISHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQ HHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEHH SVSYAAKVSGTYNVGHVEGASCMLDRESTTVDTQNLESKYLKEGAKPKVRVGQTVEQSVS HHHHHEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHHH YAKKASTGIPIVKKDVKEGGGGRGMLVKKKLLL HHHHHCCCCCHHHHHHHCCCCCCCEEEHHHHCC >Mature Secondary Structure MLMSGDEAAKESPRKKKKSKNKKTGSPLKQVETRTITIESKQSIDTEERTGLLSEQLSSM CCCCCCHHHHCCHHHHHHHCCCCCCCHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHH HLESCDQDIVKAKGQDVQHLTEKKDGGISHVLLGGTIKPRSRRSGKLTLRNMGSASFTTQ HHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEHH SVSYAAKVSGTYNVGHVEGASCMLDRESTTVDTQNLESKYLKEGAKPKVRVGQTVEQSVS HHHHHEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCEECCHHHHHHHH YAKKASTGIPIVKKDVKEGGGGRGMLVKKKLLL HHHHHCCCCCHHHHHHHCCCCCCCEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA