| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657565
Identifier: 88657565
GI number: 88657565
Start: 94233
End: 96710
Strand: Direct
Name: 88657565
Synonym: ECH_0108
Alternate gene names: NA
Gene position: 94233-96710 (Clockwise)
Preceding gene: 88657757
Following gene: 88658532
Centisome position: 8.01
GC content: 35.51
Gene sequence:
>2478_bases ATGAGTGGTGATGAAATTAAAAAAGCAGCATCGAAGTCATCTGGTAAAAAAGGAAGGGCAAAAAGTAGTAAGACAAGTAG TCAGGTACAGAAGAGTCTAGAACCAGTAACTAGTGCTGGTGAGCAGGCTCCTACTGTTCAACAGGAAGAAATAGTACAAC TGCCCTCTGATTCTCAATTTGAGTCTTCTAATCAAGACATTGTGCAAACGGAGGAGCAGGTTGTTAAGAAAAAAGAAGAC GTAAAGTCTGGGGATCAATCTCAGAAAAAAGCTGTTAAAAAGAAGTTAGTGTTAAGAGACTTTTATAGTGGCTTTAAAGG TTCTAGTGAAAAAGTTCAAGTTGATATTACTGGTGGACCAATTACTGGTCAGCCTACTATGTTAAGTTATGCTGAAAGAG CTAGGATTGGGATATCTAGTAAAGAAAAGGGGAAAGCTGTTGGTCAACCTATTACATTAAGTTGTTCTGAAAAAGCTAGT AGTAGTGTAAAGGGGAAAAAAGGTCCTCATGCGGTTAGTCAAGAGGGATATGTTGTTCAGAAGGGAGATCCGGGGAGTAA GTATTTAGGGGAGGAGGTAAAGCCAAAAGTTTCTGGTATTCAACCTATAAAAGTAAAAGAAGAGAGTAAATCTAGTTCTA TATCAGAGAGTGTGGTAAAACTGTCAGATCAACCTTCAAGAAAATCCCTAAAGAAATTAGTATTGGGAGACTCCAAGGCA GGTAGTGTTCCTGGTGTGTTAAAAAGCCCTATTGAAGGGGATACTGTTGCTCGACCTTCTTTAAGCTATGCTGAAAAAGT TAGAATTGGGATATCTAGTAAAGAAAAGGAGGCAGCTGTTAGTCAACCTACTGAATTAATTTGTTCTGAAAAAGCTAGTA GTGGTGTAAAGGAGAAAAAAAGTCCTCATACGGTTAGTCAGGAGGGAAGTCAAGAGGGATATGTTGTTCAGAAGGAAGAT CTAGAAAGTAAGTATTTAAGGGAAGGGGCAAAGCCAAAAGTTTCTGGTATTCAGCCTTTAAAAGTACAAGAAGAGATTAA ATCTAGTTCTATATCAGAAAGTGTAGTAAAACCATCAGATCAACCTTCAAGGAAACCCCTAAAGAAAATAGTATTGGAAG ACACTAAGACAGGTAGTGTTCCTGGTGTGTTAAAAAGCCCTACTGAAGGGGATACTGTTGCTCGACCTTCTTTAAGCTAT GCTGAAAAAGTTAGAATTGGGATATCTAGTAAAGAAAAGGAGGCAGCTGTTGCTCGATCTGCTGTATTAAGTTATGCTGA AAAAGGTAAAGTTGGAATATCTAGTGAAAAGAAGCAGTCAAAAGATCCTGATGATGTTATTGTTCTTAGTACTAGTGGTA AATCAGTAAATGATGACTTACAACCTGTTCCTCAAGTATTAATTCCAGTGCAGGTTGTGCCTGCTCAGCACATTGTTAGT CGTCCTGTTATTTACAAACATTTGTCATATGGTTCTAAAGCTGGCTATAGTCTTGCTATACAGCAATTTAGAGAAGAGAA AATATGGGATTTTGCAAAAATGCATATGGCATATGTTCATGACTCACTAAATTATATGTTTTTTGTGAAAAATGGAAAGC TTTTACTAAAGCCTGAAATTCGAGATCTTCTATTAAAAATAACTAACAATATAGATCTATGTACCTTTTTAATGAAAATG GTAATGCTAGATCATCTGATGAGTAGACTTTGTAAGTTTTATGTTAGTGATAGCCTGAAGTACTGTGCAAGTCATTTTCG TAATCCAAGTCTTGTAGATAACTTACTTATTCAGATTTTGAGTAAAAAACGTATTGACTGTATAACAATGTCACAAGAAC TGCGATATAATCTTGCTATGTGTACTAAAGGTTATGACGCTGAAGTTTTTGAGCTACATGATAGTATTTTTTACAGTGAA GTGTTAAGCCTATACTGTGAATTTATGCATGCATCAGTTGATGATGAACAATCTAAAACTTTGTGTAGTTTGGTAGAGTT ATCTTGTGCTTTACAGTTTGGACAAATGTATCATGTACTTGGTAAGTCTAAACATATGGTTGTTGAGGGTATGAATATAG AGAAAATGGAAAAAGACTTGTCTGAAGGAAAAGATGTAAAACAGTTTATTTTTCGTGCTAGAATTTTTGGTGGCTACTGT TATGCAATGCGAAAAGCATTAAGACATATGTATATTCCAACTGATAAAAATACTGCGTGTGCGGTAGCTGGATTAAATGT TCCATCTAGAATGTTGAAAGTATGTAGTAAGGACATTGCTGAGATCATTGATGATCATGTTAAAAGAAATAAAATGGACT TTAGTGTTTTTGTTAATAATATGGTAAGTTCTGTAAAGAGATTCATGGTGAATCGACATACAAGGTTTCTAGTACGAGAA GACATTTCAATATATCAGGCAAAAATAAGTAGTAAATATAAAACAATAGGACCTGATAGCCAGGTTTGTTCATTATAG
Upstream 100 bases:
>100_bases TTAATAAATTCTTTTTCCAATCATATAGATTAAGTGTGTTATTATGTTATTCTCTATAGTTGCTGTTGTTACTGCAGCTG CTATTGCTGTAGTCATGATG
Downstream 100 bases:
>100_bases GTTTACAGACTTTATATATGTTAACAATATTTTAAAGGTGTGTGATAAGTAATATAAGCATGTGAGAGATTTTTGTACTT ATTGTTGAATAAGTGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 825; Mature: 824
Protein sequence:
>825_residues MSGDEIKKAASKSSGKKGRAKSSKTSSQVQKSLEPVTSAGEQAPTVQQEEIVQLPSDSQFESSNQDIVQTEEQVVKKKED VKSGDQSQKKAVKKKLVLRDFYSGFKGSSEKVQVDITGGPITGQPTMLSYAERARIGISSKEKGKAVGQPITLSCSEKAS SSVKGKKGPHAVSQEGYVVQKGDPGSKYLGEEVKPKVSGIQPIKVKEESKSSSISESVVKLSDQPSRKSLKKLVLGDSKA GSVPGVLKSPIEGDTVARPSLSYAEKVRIGISSKEKEAAVSQPTELICSEKASSGVKEKKSPHTVSQEGSQEGYVVQKED LESKYLREGAKPKVSGIQPLKVQEEIKSSSISESVVKPSDQPSRKPLKKIVLEDTKTGSVPGVLKSPTEGDTVARPSLSY AEKVRIGISSKEKEAAVARSAVLSYAEKGKVGISSEKKQSKDPDDVIVLSTSGKSVNDDLQPVPQVLIPVQVVPAQHIVS RPVIYKHLSYGSKAGYSLAIQQFREEKIWDFAKMHMAYVHDSLNYMFFVKNGKLLLKPEIRDLLLKITNNIDLCTFLMKM VMLDHLMSRLCKFYVSDSLKYCASHFRNPSLVDNLLIQILSKKRIDCITMSQELRYNLAMCTKGYDAEVFELHDSIFYSE VLSLYCEFMHASVDDEQSKTLCSLVELSCALQFGQMYHVLGKSKHMVVEGMNIEKMEKDLSEGKDVKQFIFRARIFGGYC YAMRKALRHMYIPTDKNTACAVAGLNVPSRMLKVCSKDIAEIIDDHVKRNKMDFSVFVNNMVSSVKRFMVNRHTRFLVRE DISIYQAKISSKYKTIGPDSQVCSL
Sequences:
>Translated_825_residues MSGDEIKKAASKSSGKKGRAKSSKTSSQVQKSLEPVTSAGEQAPTVQQEEIVQLPSDSQFESSNQDIVQTEEQVVKKKED VKSGDQSQKKAVKKKLVLRDFYSGFKGSSEKVQVDITGGPITGQPTMLSYAERARIGISSKEKGKAVGQPITLSCSEKAS SSVKGKKGPHAVSQEGYVVQKGDPGSKYLGEEVKPKVSGIQPIKVKEESKSSSISESVVKLSDQPSRKSLKKLVLGDSKA GSVPGVLKSPIEGDTVARPSLSYAEKVRIGISSKEKEAAVSQPTELICSEKASSGVKEKKSPHTVSQEGSQEGYVVQKED LESKYLREGAKPKVSGIQPLKVQEEIKSSSISESVVKPSDQPSRKPLKKIVLEDTKTGSVPGVLKSPTEGDTVARPSLSY AEKVRIGISSKEKEAAVARSAVLSYAEKGKVGISSEKKQSKDPDDVIVLSTSGKSVNDDLQPVPQVLIPVQVVPAQHIVS RPVIYKHLSYGSKAGYSLAIQQFREEKIWDFAKMHMAYVHDSLNYMFFVKNGKLLLKPEIRDLLLKITNNIDLCTFLMKM VMLDHLMSRLCKFYVSDSLKYCASHFRNPSLVDNLLIQILSKKRIDCITMSQELRYNLAMCTKGYDAEVFELHDSIFYSE VLSLYCEFMHASVDDEQSKTLCSLVELSCALQFGQMYHVLGKSKHMVVEGMNIEKMEKDLSEGKDVKQFIFRARIFGGYC YAMRKALRHMYIPTDKNTACAVAGLNVPSRMLKVCSKDIAEIIDDHVKRNKMDFSVFVNNMVSSVKRFMVNRHTRFLVRE DISIYQAKISSKYKTIGPDSQVCSL >Mature_824_residues SGDEIKKAASKSSGKKGRAKSSKTSSQVQKSLEPVTSAGEQAPTVQQEEIVQLPSDSQFESSNQDIVQTEEQVVKKKEDV KSGDQSQKKAVKKKLVLRDFYSGFKGSSEKVQVDITGGPITGQPTMLSYAERARIGISSKEKGKAVGQPITLSCSEKASS SVKGKKGPHAVSQEGYVVQKGDPGSKYLGEEVKPKVSGIQPIKVKEESKSSSISESVVKLSDQPSRKSLKKLVLGDSKAG SVPGVLKSPIEGDTVARPSLSYAEKVRIGISSKEKEAAVSQPTELICSEKASSGVKEKKSPHTVSQEGSQEGYVVQKEDL ESKYLREGAKPKVSGIQPLKVQEEIKSSSISESVVKPSDQPSRKPLKKIVLEDTKTGSVPGVLKSPTEGDTVARPSLSYA EKVRIGISSKEKEAAVARSAVLSYAEKGKVGISSEKKQSKDPDDVIVLSTSGKSVNDDLQPVPQVLIPVQVVPAQHIVSR PVIYKHLSYGSKAGYSLAIQQFREEKIWDFAKMHMAYVHDSLNYMFFVKNGKLLLKPEIRDLLLKITNNIDLCTFLMKMV MLDHLMSRLCKFYVSDSLKYCASHFRNPSLVDNLLIQILSKKRIDCITMSQELRYNLAMCTKGYDAEVFELHDSIFYSEV LSLYCEFMHASVDDEQSKTLCSLVELSCALQFGQMYHVLGKSKHMVVEGMNIEKMEKDLSEGKDVKQFIFRARIFGGYCY AMRKALRHMYIPTDKNTACAVAGLNVPSRMLKVCSKDIAEIIDDHVKRNKMDFSVFVNNMVSSVKRFMVNRHTRFLVRED ISIYQAKISSKYKTIGPDSQVCSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91110; Mature: 90979
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDEIKKAASKSSGKKGRAKSSKTSSQVQKSLEPVTSAGEQAPTVQQEEIVQLPSDSQF CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC ESSNQDIVQTEEQVVKKKEDVKSGDQSQKKAVKKKLVLRDFYSGFKGSSEKVQVDITGGP CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC ITGQPTMLSYAERARIGISSKEKGKAVGQPITLSCSEKASSSVKGKKGPHAVSQEGYVVQ CCCCCHHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCCEEEE KGDPGSKYLGEEVKPKVSGIQPIKVKEESKSSSISESVVKLSDQPSRKSLKKLVLGDSKA CCCCCHHHCCCCCCCHHCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC GSVPGVLKSPIEGDTVARPSLSYAEKVRIGISSKEKEAAVSQPTELICSEKASSGVKEKK CCCCCHHCCCCCCCCCCCCCHHHHHHHEECCCCCHHHHHHCCCHHHHHHHHHHCCCCCCC SPHTVSQEGSQEGYVVQKEDLESKYLREGAKPKVSGIQPLKVQEEIKSSSISESVVKPSD CCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC QPSRKPLKKIVLEDTKTGSVPGVLKSPTEGDTVARPSLSYAEKVRIGISSKEKEAAVARS CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCHHHHHHHHH AVLSYAEKGKVGISSEKKQSKDPDDVIVLSTSGKSVNDDLQPVPQVLIPVQVVPAQHIVS HHHHHHHCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCEECCHHHHHH RPVIYKHLSYGSKAGYSLAIQQFREEKIWDFAKMHMAYVHDSLNYMFFVKNGKLLLKPEI CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHH RDLLLKITNNIDLCTFLMKMVMLDHLMSRLCKFYVSDSLKYCASHFRNPSLVDNLLIQIL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SKKRIDCITMSQELRYNLAMCTKGYDAEVFELHDSIFYSEVLSLYCEFMHASVDDEQSKT HHCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LCSLVELSCALQFGQMYHVLGKSKHMVVEGMNIEKMEKDLSEGKDVKQFIFRARIFGGYC HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH YAMRKALRHMYIPTDKNTACAVAGLNVPSRMLKVCSKDIAEIIDDHVKRNKMDFSVFVNN HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH MVSSVKRFMVNRHTRFLVREDISIYQAKISSKYKTIGPDSQVCSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC >Mature Secondary Structure SGDEIKKAASKSSGKKGRAKSSKTSSQVQKSLEPVTSAGEQAPTVQQEEIVQLPSDSQF CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCC ESSNQDIVQTEEQVVKKKEDVKSGDQSQKKAVKKKLVLRDFYSGFKGSSEKVQVDITGGP CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC ITGQPTMLSYAERARIGISSKEKGKAVGQPITLSCSEKASSSVKGKKGPHAVSQEGYVVQ CCCCCHHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHHHCCCCCCCCCCCCCCCCEEEE KGDPGSKYLGEEVKPKVSGIQPIKVKEESKSSSISESVVKLSDQPSRKSLKKLVLGDSKA CCCCCHHHCCCCCCCHHCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC GSVPGVLKSPIEGDTVARPSLSYAEKVRIGISSKEKEAAVSQPTELICSEKASSGVKEKK CCCCCHHCCCCCCCCCCCCCHHHHHHHEECCCCCHHHHHHCCCHHHHHHHHHHCCCCCCC SPHTVSQEGSQEGYVVQKEDLESKYLREGAKPKVSGIQPLKVQEEIKSSSISESVVKPSD CCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC QPSRKPLKKIVLEDTKTGSVPGVLKSPTEGDTVARPSLSYAEKVRIGISSKEKEAAVARS CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCHHHHHHHHH AVLSYAEKGKVGISSEKKQSKDPDDVIVLSTSGKSVNDDLQPVPQVLIPVQVVPAQHIVS HHHHHHHCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCEECCHHHHHH RPVIYKHLSYGSKAGYSLAIQQFREEKIWDFAKMHMAYVHDSLNYMFFVKNGKLLLKPEI CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHH RDLLLKITNNIDLCTFLMKMVMLDHLMSRLCKFYVSDSLKYCASHFRNPSLVDNLLIQIL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SKKRIDCITMSQELRYNLAMCTKGYDAEVFELHDSIFYSEVLSLYCEFMHASVDDEQSKT HHCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LCSLVELSCALQFGQMYHVLGKSKHMVVEGMNIEKMEKDLSEGKDVKQFIFRARIFGGYC HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH YAMRKALRHMYIPTDKNTACAVAGLNVPSRMLKVCSKDIAEIIDDHVKRNKMDFSVFVNN HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH MVSSVKRFMVNRHTRFLVREDISIYQAKISSKYKTIGPDSQVCSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA