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The map label for this gene is ybeB [H]

Identifier: 88608845

GI number: 88608845

Start: 815792

End: 816124

Strand: Reverse

Name: ybeB [H]

Synonym: NSE_0919

Alternate gene names: 88608845

Gene position: 816124-815792 (Counterclockwise)

Preceding gene: 88608837

Following gene: 88608789

Centisome position: 95.01

GC content: 39.04

Gene sequence:

>333_bases
ATGGTTAGTACTCCCTCTGCATGTAGAAGAATGGAATCCCAAATAGTTTCTTTAATCCTGGAAAGTTTATCTGTCCATAA
GGGGAGAGATATTAAGATTTATGGTGGAAGAGGTATAACAGGTTGCATGGTTGTTGCTTCTTCTGATTCACATAAGCACG
TAAAAACTCTGGCTGACTTTGTCGTAAAACTAAGCAAAGAAAAAGGAATATCCGTAAAGACCGAAGGCTACGACTTAGGT
AATTGGGTGTTGATCGACATGGGTGAAGTTATAGTGCACATCTTTAAGGATGACGTCAGAAAGTATTATGAAGTAGACGC
TCTATGGAACTAG

Upstream 100 bases:

>100_bases
GTAACTATCAATATTTCTATGTCACCAGGAACCCTTGTCAGGAGTTGGTCCTGGATGAATAAGTTTTTCAGGGTTTCGTA
TTGTTCTGGCTTTCTGTAAA

Downstream 100 bases:

>100_bases
AAGAACTACAATCCTTACTTGGAGTGTATTTTAAAAACAAAGACTTACTTGTCGAAGCTTTAACGCATCCAAGTGTTGAA
AAGTGTCCATCTTACGAGAG

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVSTPSACRRMESQIVSLILESLSVHKGRDIKIYGGRGITGCMVVASSDSHKHVKTLADFVVKLSKEKGISVKTEGYDLG
NWVLIDMGEVIVHIFKDDVRKYYEVDALWN

Sequences:

>Translated_110_residues
MVSTPSACRRMESQIVSLILESLSVHKGRDIKIYGGRGITGCMVVASSDSHKHVKTLADFVVKLSKEKGISVKTEGYDLG
NWVLIDMGEVIVHIFKDDVRKYYEVDALWN
>Mature_110_residues
MVSTPSACRRMESQIVSLILESLSVHKGRDIKIYGGRGITGCMVVASSDSHKHVKTLADFVVKLSKEKGISVKTEGYDLG
NWVLIDMGEVIVHIFKDDVRKYYEVDALWN

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=88, Percent_Identity=36.3636363636364, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12300; Mature: 12300

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTPSACRRMESQIVSLILESLSVHKGRDIKIYGGRGITGCMVVASSDSHKHVKTLADF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHH
VVKLSKEKGISVKTEGYDLGNWVLIDMGEVIVHIFKDDVRKYYEVDALWN
HHHHHCCCCCEEEECCEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVSTPSACRRMESQIVSLILESLSVHKGRDIKIYGGRGITGCMVVASSDSHKHVKTLADF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHH
VVKLSKEKGISVKTEGYDLGNWVLIDMGEVIVHIFKDDVRKYYEVDALWN
HHHHHCCCCCEEEECCEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]