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The map label for this gene is ccmA [H]

Identifier: 88608806

GI number: 88608806

Start: 619457

End: 620374

Strand: Direct

Name: ccmA [H]

Synonym: NSE_0699

Alternate gene names: 88608806

Gene position: 619457-620374 (Clockwise)

Preceding gene: 88608687

Following gene: 88608875

Centisome position: 72.11

GC content: 36.93

Gene sequence:

>918_bases
ATGCTTAGAATAGATGGAAAAAATATCGGTTTTGCTAGGGAGGGAATACAGATTCTCTCAGATATAAACTTTTCCGTGAA
AAGTGGCCAGATTTTGTGGATTAGAGGTGATAATGGAACGGGGAAAACAACACTTTTACGCATCATTGCGGGGGTGCTCA
AAACCTTTTCTGGAAGCATATCATTTTATTCACAGGGAGACGCAAGAGCCAATGAGCTAAAAGATATTTATGATAAAGAA
GCAAAACAACACGATAAGACGCTCAATACAGACAGAATTGAAAAAAAGGAAAACCTAGCCAGAAACTACCCTGAGGTAGA
AAACAAGTCAGTTAGACAATCAGAATACGCGCACTGTTCTTATAAAGTTACCAACAATCAAAACCTGGATGACACGTACA
ACACACTAGAAACTACGAATGTGGTAAAGAACACTTTGTGCAATAAAGACAAGCATGATGAGAAAAGAGAAACCAAGAAG
TTTATAAGCACAGGTGTTGGAGAAAATTTTACTCAAAAAATTCAGCCTCATAGTGAGATCACTTATATTGGAGAAAAACT
AGCCTGTGATGAGGAGCGTACTGTACTAGAGAACCTATATTTTTGGGCGAAGCTCAGGGATTGTACCCATTTACTACAAG
CTACATTAGAATTTTTCGACTTGACGAAAATATCGAACGTAGAAGTAAGAAAACTCTCTAGCGGCTGGAAGAAAAGAGTA
AGTCTATCAAAATTGCTGCTCTTCAACTCAAAGATTTGGATACTTGATGAACCTTTTATCCATTTGGACAAGAAAAGTAT
AACACTATTCACAGAACTCTTCGATTTAAGACTAGCACGCAATGGAATTATTTTTCTCGTGCACCATAATGAATTGGATA
TCGATGATAAAAAAATAACCAGATTAGAGCTAAGCTGA

Upstream 100 bases:

>100_bases
GATAGAGTTGCTATGCTACACTTGGGGAAGATCATATGGCAAGGAAACACGGGTTCATTAGACGCCAGCGACAATCCACA
CATAAAAAACTTTTTGTCAT

Downstream 100 bases:

>100_bases
TCCTCCAGTAAACAGGACTCAAAACGCGCCCTTCTAAAATTCACACAATTGACATGGCTGCGCTTTGTAATCTCTCAGAA
ATACGGTACACAATAGCATC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: Heme exporter protein A [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MLRIDGKNIGFAREGIQILSDINFSVKSGQILWIRGDNGTGKTTLLRIIAGVLKTFSGSISFYSQGDARANELKDIYDKE
AKQHDKTLNTDRIEKKENLARNYPEVENKSVRQSEYAHCSYKVTNNQNLDDTYNTLETTNVVKNTLCNKDKHDEKRETKK
FISTGVGENFTQKIQPHSEITYIGEKLACDEERTVLENLYFWAKLRDCTHLLQATLEFFDLTKISNVEVRKLSSGWKKRV
SLSKLLLFNSKIWILDEPFIHLDKKSITLFTELFDLRLARNGIIFLVHHNELDIDDKKITRLELS

Sequences:

>Translated_305_residues
MLRIDGKNIGFAREGIQILSDINFSVKSGQILWIRGDNGTGKTTLLRIIAGVLKTFSGSISFYSQGDARANELKDIYDKE
AKQHDKTLNTDRIEKKENLARNYPEVENKSVRQSEYAHCSYKVTNNQNLDDTYNTLETTNVVKNTLCNKDKHDEKRETKK
FISTGVGENFTQKIQPHSEITYIGEKLACDEERTVLENLYFWAKLRDCTHLLQATLEFFDLTKISNVEVRKLSSGWKKRV
SLSKLLLFNSKIWILDEPFIHLDKKSITLFTELFDLRLARNGIIFLVHHNELDIDDKKITRLELS
>Mature_305_residues
MLRIDGKNIGFAREGIQILSDINFSVKSGQILWIRGDNGTGKTTLLRIIAGVLKTFSGSISFYSQGDARANELKDIYDKE
AKQHDKTLNTDRIEKKENLARNYPEVENKSVRQSEYAHCSYKVTNNQNLDDTYNTLETTNVVKNTLCNKDKHDEKRETKK
FISTGVGENFTQKIQPHSEITYIGEKLACDEERTVLENLYFWAKLRDCTHLLQATLEFFDLTKISNVEVRKLSSGWKKRV
SLSKLLLFNSKIWILDEPFIHLDKKSITLFTELFDLRLARNGIIFLVHHNELDIDDKKITRLELS

Specific function: Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system [H]

COG id: COG4133

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87082064, Length=129, Percent_Identity=31.7829457364341, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR005895
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.41 [H]

Molecular weight: Translated: 35253; Mature: 35253

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIDGKNIGFAREGIQILSDINFSVKSGQILWIRGDNGTGKTTLLRIIAGVLKTFSGSI
CEEECCCCCCHHHHHHHHHHCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCE
SFYSQGDARANELKDIYDKEAKQHDKTLNTDRIEKKENLARNYPEVENKSVRQSEYAHCS
EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEE
YKVTNNQNLDDTYNTLETTNVVKNTLCNKDKHDEKRETKKFISTGVGENFTQKIQPHSEI
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCHH
TYIGEKLACDEERTVLENLYFWAKLRDCTHLLQATLEFFDLTKISNVEVRKLSSGWKKRV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SLSKLLLFNSKIWILDEPFIHLDKKSITLFTELFDLRLARNGIIFLVHHNELDIDDKKIT
HHHHHHHHCCEEEEEECCCEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEE
RLELS
EEECC
>Mature Secondary Structure
MLRIDGKNIGFAREGIQILSDINFSVKSGQILWIRGDNGTGKTTLLRIIAGVLKTFSGSI
CEEECCCCCCHHHHHHHHHHCCCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCE
SFYSQGDARANELKDIYDKEAKQHDKTLNTDRIEKKENLARNYPEVENKSVRQSEYAHCS
EEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCEEE
YKVTNNQNLDDTYNTLETTNVVKNTLCNKDKHDEKRETKKFISTGVGENFTQKIQPHSEI
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCHH
TYIGEKLACDEERTVLENLYFWAKLRDCTHLLQATLEFFDLTKISNVEVRKLSSGWKKRV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
SLSKLLLFNSKIWILDEPFIHLDKKSITLFTELFDLRLARNGIIFLVHHNELDIDDKKIT
HHHHHHHHCCEEEEEECCCEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEE
RLELS
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA