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The map label for this gene is 88608802

Identifier: 88608802

GI number: 88608802

Start: 6618

End: 7808

Strand: Direct

Name: 88608802

Synonym: NSE_0007

Alternate gene names: NA

Gene position: 6618-7808 (Clockwise)

Preceding gene: 88608480

Following gene: 88608358

Centisome position: 0.77

GC content: 40.47

Gene sequence:

>1191_bases
ATGCTAACAAAAATATTTAAAAAATCAAGAAGCAAAGCTTGCCCCAATAGCAGAAGCCAACTAGGCGGTGAGTGTCTATA
TAATACATATACAGAACTCTGGAGCGGGAGAGACTACAGTGCATTTGCCCAAAAAGCGTACATAAGAAATGTGATCGCCT
CACGTGCAATCAGTATAGTAGCAGTGGCCGCCTCTTCTGTTCCTATACAACTTTTTGAATGTAGTGGGACGGAGAAGAAA
CGTTGCTTAGTCTCTCATCCGCTCAATGAGCTATTAAACGAGCCTAATCCCAATATGTCAAGAGTAACATTGATAAAAAA
TGCTGTTATGTACAAGCTAATCAGCGGAAATTTATACCTTCTTAAGATCGGGAACGGTTTACCAAAAGAACTGCACCTTC
TAAGACCTGATAGGGTCACAGTTATACCAGGAAGTGATTGTTTACCTTTGGGATACAGATATCGAGTTGGAAACTACGAA
AGGGAATATTATATGAACAAAATCACTGGGGACTGTGATGTTCTACACATAAAGAATTTTCACCCGTATAACGACTGGTA
TGGATTATCGCCAGTAGAGGCGGCAATGTACAGCATAGATCAACATAATCAGGCTAGTCTTTGGAACCAAGCTATGCTCA
AAAATGGTGCTAGGCCCAGCGGAGCGTTTATATCAAAATCTAAGGAGCCAATGCCACAAGAACAGTTCAAACGTTTAAGC
AGACAACTTGGAGACTGTTCCGGTGCTGAAAATGCAGGAAAAGCTATTCTTATAGAGGGAGGGATAGAGTGGAAAGAAAT
GAGCATCTCTCCAAAGGAAATGGATTTTCTTCAAAGTAAGTACAATTCCGCCAGAGAGATAGCGTTGGCATTTGGTGTAC
CGCCACAATTACTGGGAATACCGGGAGACAACACATATAGCAACTTAATAGAAGCTAGACTATCCCTATGGGAAGAAACA
GTTCTCCCTATACTCGATGAAATAGTGCATAGCTTAAATGTTTGGCTTACTCCGGTTTTTGGAGATAATTTAGAGTTCGC
GTACGAAAAAGATGGTATAGACGCGCTATCCAAGAAGAGAGAAAAACTTTGGGATTGTGTAGAAAAGGCATCTTTTTTGA
CAATCAATGAAAAAAGGCAAGTATTTGGTTATTCCACTATGGAGGGTAAAGACGAAATAGTAGAGTCGTAA

Upstream 100 bases:

>100_bases
GCCCATATGCGCAAGCTTCGACGCATGAAATACACAAAACTGCTTCCGCAGAGGCTGTTTAGCGTGTATCTATGAGGTCC
ACCCGGACGTTACAAGAGAA

Downstream 100 bases:

>100_bases
TAAAAATTTTAAATAGAATATGTTTCAAGAGCTTGGGGGTTTAAAGGGTATTACTCCTTGAATTACCCCAAGGCTGATTT
GTTGTTGCTATTTTATTTAC

Product: HK97 family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MLTKIFKKSRSKACPNSRSQLGGECLYNTYTELWSGRDYSAFAQKAYIRNVIASRAISIVAVAASSVPIQLFECSGTEKK
RCLVSHPLNELLNEPNPNMSRVTLIKNAVMYKLISGNLYLLKIGNGLPKELHLLRPDRVTVIPGSDCLPLGYRYRVGNYE
REYYMNKITGDCDVLHIKNFHPYNDWYGLSPVEAAMYSIDQHNQASLWNQAMLKNGARPSGAFISKSKEPMPQEQFKRLS
RQLGDCSGAENAGKAILIEGGIEWKEMSISPKEMDFLQSKYNSAREIALAFGVPPQLLGIPGDNTYSNLIEARLSLWEET
VLPILDEIVHSLNVWLTPVFGDNLEFAYEKDGIDALSKKREKLWDCVEKASFLTINEKRQVFGYSTMEGKDEIVES

Sequences:

>Translated_396_residues
MLTKIFKKSRSKACPNSRSQLGGECLYNTYTELWSGRDYSAFAQKAYIRNVIASRAISIVAVAASSVPIQLFECSGTEKK
RCLVSHPLNELLNEPNPNMSRVTLIKNAVMYKLISGNLYLLKIGNGLPKELHLLRPDRVTVIPGSDCLPLGYRYRVGNYE
REYYMNKITGDCDVLHIKNFHPYNDWYGLSPVEAAMYSIDQHNQASLWNQAMLKNGARPSGAFISKSKEPMPQEQFKRLS
RQLGDCSGAENAGKAILIEGGIEWKEMSISPKEMDFLQSKYNSAREIALAFGVPPQLLGIPGDNTYSNLIEARLSLWEET
VLPILDEIVHSLNVWLTPVFGDNLEFAYEKDGIDALSKKREKLWDCVEKASFLTINEKRQVFGYSTMEGKDEIVES
>Mature_396_residues
MLTKIFKKSRSKACPNSRSQLGGECLYNTYTELWSGRDYSAFAQKAYIRNVIASRAISIVAVAASSVPIQLFECSGTEKK
RCLVSHPLNELLNEPNPNMSRVTLIKNAVMYKLISGNLYLLKIGNGLPKELHLLRPDRVTVIPGSDCLPLGYRYRVGNYE
REYYMNKITGDCDVLHIKNFHPYNDWYGLSPVEAAMYSIDQHNQASLWNQAMLKNGARPSGAFISKSKEPMPQEQFKRLS
RQLGDCSGAENAGKAILIEGGIEWKEMSISPKEMDFLQSKYNSAREIALAFGVPPQLLGIPGDNTYSNLIEARLSLWEET
VLPILDEIVHSLNVWLTPVFGDNLEFAYEKDGIDALSKKREKLWDCVEKASFLTINEKRQVFGYSTMEGKDEIVES

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 44658; Mature: 44658

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKIFKKSRSKACPNSRSQLGGECLYNTYTELWSGRDYSAFAQKAYIRNVIASRAISIV
CCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE
AVAASSVPIQLFECSGTEKKRCLVSHPLNELLNEPNPNMSRVTLIKNAVMYKLISGNLYL
EEECCCCCEEEEECCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHEECCCEEE
LKIGNGLPKELHLLRPDRVTVIPGSDCLPLGYRYRVGNYEREYYMNKITGDCDVLHIKNF
EEECCCCCHHHEEECCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCC
HPYNDWYGLSPVEAAMYSIDQHNQASLWNQAMLKNGARPSGAFISKSKEPMPQEQFKRLS
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHH
RQLGDCSGAENAGKAILIEGGIEWKEMSISPKEMDFLQSKYNSAREIALAFGVPPQLLGI
HHHCCCCCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHCCHHEEEEEECCCHHHEEC
PGDNTYSNLIEARLSLWEETVLPILDEIVHSLNVWLTPVFGDNLEFAYEKDGIDALSKKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCHHHHHHHH
EKLWDCVEKASFLTINEKRQVFGYSTMEGKDEIVES
HHHHHHHHHCCEEEECCCHHHCCCCCCCCHHHHHCC
>Mature Secondary Structure
MLTKIFKKSRSKACPNSRSQLGGECLYNTYTELWSGRDYSAFAQKAYIRNVIASRAISIV
CCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE
AVAASSVPIQLFECSGTEKKRCLVSHPLNELLNEPNPNMSRVTLIKNAVMYKLISGNLYL
EEECCCCCEEEEECCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHEECCCEEE
LKIGNGLPKELHLLRPDRVTVIPGSDCLPLGYRYRVGNYEREYYMNKITGDCDVLHIKNF
EEECCCCCHHHEEECCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEECCC
HPYNDWYGLSPVEAAMYSIDQHNQASLWNQAMLKNGARPSGAFISKSKEPMPQEQFKRLS
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHH
RQLGDCSGAENAGKAILIEGGIEWKEMSISPKEMDFLQSKYNSAREIALAFGVPPQLLGI
HHHCCCCCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHCCHHEEEEEECCCHHHEEC
PGDNTYSNLIEARLSLWEETVLPILDEIVHSLNVWLTPVFGDNLEFAYEKDGIDALSKKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCHHHHHHHH
EKLWDCVEKASFLTINEKRQVFGYSTMEGKDEIVES
HHHHHHHHHCCEEEECCCHHHCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA