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The map label for this gene is grxC2 [H]

Identifier: 88608714

GI number: 88608714

Start: 171654

End: 171974

Strand: Direct

Name: grxC2 [H]

Synonym: NSE_0203

Alternate gene names: 88608714

Gene position: 171654-171974 (Clockwise)

Preceding gene: 88608074

Following gene: 88608861

Centisome position: 19.98

GC content: 44.24

Gene sequence:

>321_bases
ATGAAAGATATCTTTGCAAAAATAGAGGGAATAATTAGGCGGCATGATGTTGTGCTTTTTATGAAGGGCACGTCTGGGCT
GCCGATGTGCGGGTTTTCAGGTGCTGTCGTCAATATTCTCAAAGCTTTAGATGTCACCTTTTATGGGGTGAATGTCTTAG
AGGATCCTGAGTTGAGGGAAGGAATAAAGAAGTTTGCAGATTGGCCGACTATCCCGCAGTTGTACGTGAAAGGTGAGTTT
ATTGGCGGATGTGACATCGTCAGGGAGATGTATGAGAACAGGGAATTGCAGACTCTTTTTGAGGATAGTTTAGCTGGCTG
A

Upstream 100 bases:

>100_bases
GTTAGTAGTTTCGGCTTTAGGAGAAATTCTTAAGGAGAGGCTCCACTCAATTTCTATTGAGGCTAAGGTTAAGAGTTAAA
AGATACGCAGTGCGTTTGTT

Downstream 100 bases:

>100_bases
GAAGCTGTCTCCGACTCAATTTTGAATACATTTGATAAGGGGGCAAAGTTTTCCTTTTGCAGGATTCTGTTGTGTCCACT
ACATCTAATGTACGTGCCTT

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKDIFAKIEGIIRRHDVVLFMKGTSGLPMCGFSGAVVNILKALDVTFYGVNVLEDPELREGIKKFADWPTIPQLYVKGEF
IGGCDIVREMYENRELQTLFEDSLAG

Sequences:

>Translated_106_residues
MKDIFAKIEGIIRRHDVVLFMKGTSGLPMCGFSGAVVNILKALDVTFYGVNVLEDPELREGIKKFADWPTIPQLYVKGEF
IGGCDIVREMYENRELQTLFEDSLAG
>Mature_106_residues
MKDIFAKIEGIIRRHDVVLFMKGTSGLPMCGFSGAVVNILKALDVTFYGVNVLEDPELREGIKKFADWPTIPQLYVKGEF
IGGCDIVREMYENRELQTLFEDSLAG

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=91, Percent_Identity=51.6483516483517, Blast_Score=110, Evalue=3e-25,
Organism=Homo sapiens, GI95113651, Length=90, Percent_Identity=45.5555555555556, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787943, Length=105, Percent_Identity=44.7619047619048, Blast_Score=105, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17556042, Length=101, Percent_Identity=49.5049504950495, Blast_Score=110, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71988153, Length=83, Percent_Identity=42.1686746987952, Blast_Score=89, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71988159, Length=105, Percent_Identity=35.2380952380952, Blast_Score=86, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6325198, Length=106, Percent_Identity=53.7735849056604, Blast_Score=111, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6321022, Length=89, Percent_Identity=44.9438202247191, Blast_Score=91, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6320303, Length=89, Percent_Identity=44.9438202247191, Blast_Score=90, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24642023, Length=91, Percent_Identity=45.0549450549451, Blast_Score=101, Evalue=7e-23,
Organism=Drosophila melanogaster, GI19921242, Length=95, Percent_Identity=38.9473684210526, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11916; Mature: 11916

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIFAKIEGIIRRHDVVLFMKGTSGLPMCGFSGAVVNILKALDVTFYGVNVLEDPELRE
CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
GIKKFADWPTIPQLYVKGEFIGGCDIVREMYENRELQTLFEDSLAG
HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MKDIFAKIEGIIRRHDVVLFMKGTSGLPMCGFSGAVVNILKALDVTFYGVNVLEDPELRE
CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHH
GIKKFADWPTIPQLYVKGEFIGGCDIVREMYENRELQTLFEDSLAG
HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA