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The map label for this gene is 88608671

Identifier: 88608671

GI number: 88608671

Start: 5975

End: 6454

Strand: Reverse

Name: 88608671

Synonym: NSE_0006

Alternate gene names: NA

Gene position: 6454-5975 (Counterclockwise)

Preceding gene: 88608655

Following gene: 88608833

Centisome position: 0.75

GC content: 41.04

Gene sequence:

>480_bases
ATGATAACCTTCGACCTGCAAAAATTCTTGGGTGCTATTGAAGCAGGAAGGGTTATATCCATTGATCCTGGAAGGCGTAT
CGTAGGTGTTGCGGTCAGTGATCCCGAACTCAGGTATATACAGAACTATTTTCAGTTCACCTCCCACGGAAGAGGTGCTG
ATGCCTTTCATATTATGAAAGTCGTTTCAGATTTTTCAGGGATAATTGTCGGCACACCATTTTCACATATTAGGAACAAC
GGATGGTTAGATTTTATAGATAAATTTGCTCAAAAATTAAGTGAGGTAACTAGGAAGCCGATTCTTATGTGTGATGAGTC
GTCGTCAACTAGTGACGTGATGATTTTACTTAGCTCTCTTTCCAGGTCAAGGCAAAAGGAGTGGAAGGATAAAATTGCTG
CTTGTTGCATTTTGGAGAAGACACTATGTACAATCATGCACCACAATCTCTGCCATCAGAGGAGGTTCGACAGTGTATAA

Upstream 100 bases:

>100_bases
TTGTGTATTTCATGCGTCGAAGCTTGCGCATATGGGCTTTTAGGCTGTTTTCTGCGCGGTAGACCCAGGTTACCTTTAGT
CGAATACCAATAGGAAGTAG

Downstream 100 bases:

>100_bases
AAAACTGTATTACTTAGTACCAGTAATTTTAGTCAGCGTGCTGTTTTTTCTGTATGAAAAGCCTGTTCCTGCAGAAAATA
AAGCCCCTCAATCAAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MITFDLQKFLGAIEAGRVISIDPGRRIVGVAVSDPELRYIQNYFQFTSHGRGADAFHIMKVVSDFSGIIVGTPFSHIRNN
GWLDFIDKFAQKLSEVTRKPILMCDESSSTSDVMILLSSLSRSRQKEWKDKIAACCILEKTLCTIMHHNLCHQRRFDSV

Sequences:

>Translated_159_residues
MITFDLQKFLGAIEAGRVISIDPGRRIVGVAVSDPELRYIQNYFQFTSHGRGADAFHIMKVVSDFSGIIVGTPFSHIRNN
GWLDFIDKFAQKLSEVTRKPILMCDESSSTSDVMILLSSLSRSRQKEWKDKIAACCILEKTLCTIMHHNLCHQRRFDSV
>Mature_159_residues
MITFDLQKFLGAIEAGRVISIDPGRRIVGVAVSDPELRYIQNYFQFTSHGRGADAFHIMKVVSDFSGIIVGTPFSHIRNN
GWLDFIDKFAQKLSEVTRKPILMCDESSSTSDVMILLSSLSRSRQKEWKDKIAACCILEKTLCTIMHHNLCHQRRFDSV

Specific function: Unknown

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18052; Mature: 18052

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFDLQKFLGAIEAGRVISIDPGRRIVGVAVSDPELRYIQNYFQFTSHGRGADAFHIMK
CCCCHHHHHHHHHHCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHH
VVSDFSGIIVGTPFSHIRNNGWLDFIDKFAQKLSEVTRKPILMCDESSSTSDVMILLSSL
HHHHCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHH
SRSRQKEWKDKIAACCILEKTLCTIMHHNLCHQRRFDSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MITFDLQKFLGAIEAGRVISIDPGRRIVGVAVSDPELRYIQNYFQFTSHGRGADAFHIMK
CCCCHHHHHHHHHHCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHH
VVSDFSGIIVGTPFSHIRNNGWLDFIDKFAQKLSEVTRKPILMCDESSSTSDVMILLSSL
HHHHCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHH
SRSRQKEWKDKIAACCILEKTLCTIMHHNLCHQRRFDSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA