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The map label for this gene is 88608624

Identifier: 88608624

GI number: 88608624

Start: 793656

End: 794282

Strand: Direct

Name: 88608624

Synonym: NSE_0889

Alternate gene names: NA

Gene position: 793656-794282 (Clockwise)

Preceding gene: 88608032

Following gene: 88607963

Centisome position: 92.39

GC content: 43.06

Gene sequence:

>627_bases
ATGTCAAGGATCGTTAGTGTTGCAGTATTTTCAGCACTTTTATTGCTGTCCGGCTGCTTGCATATAAACACATCGCGACG
TGGTGGTCCTGCTTCTTCACAGTTTGCCGATGTGGAGTGCCAGTGTCCAGCAAAAAACGGAACAGTGGCCATAATTCATT
TCAGGTCTGGTGAATCCACTGCACTACCTGAGGCAAGACAGCTCATTTATGAGAACATTGCTGAGTGTATTGCCTTGAGA
ATTAGCGAGAATCCTAACCTAAAAGTTTTAATTACAGGTCACACTGACAAGCTTGAAACTCCGGAGAACAGCCTTGGGCT
TGGCAAAGAGAGAGCCATTACGGTTCTTGAATACTTATTGGGAGACGTCTTTGAAAACCTAAACGATCTTGCTCAAGAAT
TCGGGAGTTTTCCCATCTCTTCTGAAAAGGTAGACAATTCAGGAAGCACGGGTGATTTGGATAATGTGACACAAGCAGTT
TCTTTTTCAAAAGATGTTTTAAGAAACCATTTTTGCACAGCTTCCGCAGGTAAGGATAAGCTTGTTGACGAGGGTGATAC
AGAAGAGGCTCACGCAAGAAATCGTAGGGTAATTATAGAGTTTGTACAAGAATGTGATCAAGGGTAG

Upstream 100 bases:

>100_bases
GGGTTGGGTACCATCTCGGCGGGTTTGCTTTCTGGGTTACATGTATGCCGGTGGGCACTCTAGCTGAGAATTTTATGATG
TTGGGAACTAGGGGGATACA

Downstream 100 bases:

>100_bases
TGTCTTGGAATCAGTATGGTGAAGCTTGGGAAGTCTTCGAGTTCTCTTCTCTCTATCCGCTCTTTTCAACGGCTTCGTAT
TTCTACGTATGGGTGCATGA

Product: putative peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSRIVSVAVFSALLLLSGCLHINTSRRGGPASSQFADVECQCPAKNGTVAIIHFRSGESTALPEARQLIYENIAECIALR
ISENPNLKVLITGHTDKLETPENSLGLGKERAITVLEYLLGDVFENLNDLAQEFGSFPISSEKVDNSGSTGDLDNVTQAV
SFSKDVLRNHFCTASAGKDKLVDEGDTEEAHARNRRVIIEFVQECDQG

Sequences:

>Translated_208_residues
MSRIVSVAVFSALLLLSGCLHINTSRRGGPASSQFADVECQCPAKNGTVAIIHFRSGESTALPEARQLIYENIAECIALR
ISENPNLKVLITGHTDKLETPENSLGLGKERAITVLEYLLGDVFENLNDLAQEFGSFPISSEKVDNSGSTGDLDNVTQAV
SFSKDVLRNHFCTASAGKDKLVDEGDTEEAHARNRRVIIEFVQECDQG
>Mature_207_residues
SRIVSVAVFSALLLLSGCLHINTSRRGGPASSQFADVECQCPAKNGTVAIIHFRSGESTALPEARQLIYENIAECIALRI
SENPNLKVLITGHTDKLETPENSLGLGKERAITVLEYLLGDVFENLNDLAQEFGSFPISSEKVDNSGSTGDLDNVTQAVS
FSKDVLRNHFCTASAGKDKLVDEGDTEEAHARNRRVIIEFVQECDQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22568; Mature: 22436

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIVSVAVFSALLLLSGCLHINTSRRGGPASSQFADVECQCPAKNGTVAIIHFRSGEST
CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCC
ALPEARQLIYENIAECIALRISENPNLKVLITGHTDKLETPENSLGLGKERAITVLEYLL
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHH
GDVFENLNDLAQEFGSFPISSEKVDNSGSTGDLDNVTQAVSFSKDVLRNHFCTASAGKDK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LVDEGDTEEAHARNRRVIIEFVQECDQG
CCCCCCCHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SRIVSVAVFSALLLLSGCLHINTSRRGGPASSQFADVECQCPAKNGTVAIIHFRSGEST
CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCC
ALPEARQLIYENIAECIALRISENPNLKVLITGHTDKLETPENSLGLGKERAITVLEYLL
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHH
GDVFENLNDLAQEFGSFPISSEKVDNSGSTGDLDNVTQAVSFSKDVLRNHFCTASAGKDK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LVDEGDTEEAHARNRRVIIEFVQECDQG
CCCCCCCHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA