Click here to switch to the map view.

The map label for this gene is 88608563

Identifier: 88608563

GI number: 88608563

Start: 295429

End: 295659

Strand: Direct

Name: 88608563

Synonym: NSE_0361

Alternate gene names: NA

Gene position: 295429-295659 (Clockwise)

Preceding gene: 88608273

Following gene: 88608416

Centisome position: 34.39

GC content: 39.83

Gene sequence:

>231_bases
TTGTATGCGAGTTTTCCTAGAGCACAATCAGGTTATTCATTCGTTTTGCTGCTAGGGTGTTTTGGCTTGATTTTCCTTTG
GGTGTCTGATGTGCTCTATTTCTGCAGTAATTTTTTTTGTTACAGGAAAGAAAGGGGTGCTTGCTGCATGCAGTTTTATC
GTTTGTGCGTCTTGGGTGTTTTACAAGGAGGAATCAACTTATTGAAGTTAACTTTCTCGTGCGAAGCTTAA

Upstream 100 bases:

>100_bases
GATGCTGGTCGCGTACTGTCTGGGGACCACGACACAATAGAAGTGATAGAGGATAAATGGATATTTGAGAGGTCATTAAA
GTCGCCTCATAATAGCTGGG

Downstream 100 bases:

>100_bases
AGACGCGTTGCTCTCTCGAAGTTAGTCCATTTCTGCTATACAAGAAAGCCTGCAGAGTTGCTCGGGGTTAAGTTCCTCTA
TTCTCATTGTAGGACTGGCT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MYASFPRAQSGYSFVLLLGCFGLIFLWVSDVLYFCSNFFCYRKERGACCMQFYRLCVLGVLQGGINLLKLTFSCEA

Sequences:

>Translated_76_residues
MYASFPRAQSGYSFVLLLGCFGLIFLWVSDVLYFCSNFFCYRKERGACCMQFYRLCVLGVLQGGINLLKLTFSCEA
>Mature_76_residues
MYASFPRAQSGYSFVLLLGCFGLIFLWVSDVLYFCSNFFCYRKERGACCMQFYRLCVLGVLQGGINLLKLTFSCEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8680; Mature: 8680

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
9.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
11.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYASFPRAQSGYSFVLLLGCFGLIFLWVSDVLYFCSNFFCYRKERGACCMQFYRLCVLGV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LQGGINLLKLTFSCEA
HHCCHHHHHEEEECCC
>Mature Secondary Structure
MYASFPRAQSGYSFVLLLGCFGLIFLWVSDVLYFCSNFFCYRKERGACCMQFYRLCVLGV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LQGGINLLKLTFSCEA
HHCCHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA