Click here to switch to the map view.

The map label for this gene is 88608557

Identifier: 88608557

GI number: 88608557

Start: 629429

End: 629944

Strand: Direct

Name: 88608557

Synonym: NSE_0710

Alternate gene names: NA

Gene position: 629429-629944 (Clockwise)

Preceding gene: 88608002

Following gene: 88608545

Centisome position: 73.27

GC content: 43.99

Gene sequence:

>516_bases
ATGCGGGCGTCCTGCGCCCTTGCAAATGCTGAGCTGGTCAGTTATCTGGCCTCGCTCAGGACGCTTTGTGCTACCTTCGT
TCAGTATAATCCTGACGGCACACTCAGTACCGGAACTCTTTTTCTTGCCGTCCCTCATAAATTCAGGATTGACTATCACA
AGGAAGGTGTCTCTGTCGTGATGAACAAGGGCATGATGACTTACCGCGATGCTACTTTAAAGGAATCAAGGAGCTTCTTC
CTCGGTAAGTCGGATCCCCTGTTATTAGCAATATCGGATCTCGGAGCCTTACATAAGTATAAACAATCCATTAGTGGTGA
ACTCTTATATCTTGGGAGATCCTCGAAAAACAAAAAGTACGTCTTAGTACTTAGCCATTCTCCCGCTGAAATAAGGGAAA
TACTTTTCGAGGACGACTCTAAACAAGTCACTAGAATGGTTCTTAGTGATGTGTGCTATAATGCCGATCTTGATAGGCAC
ATTTTTGATATAACTGAGTCATTTCTACCTCAATAG

Upstream 100 bases:

>100_bases
TAAGAAGTAGTACCGACAGTTTTAGTTTTTCTTTTGAATTGAGTGTGCAGTGTCAGTGAGGGGATTTGCGGTTTTGTTCT
GTGTCCTCGCTTTTTGCTGT

Downstream 100 bases:

>100_bases
AGACGTAAGACTCTCAATCGCGGTTTTTCCTTTTTTATCATCTTGTTTTGGGTCACGACACGAACCTCTCATCAACAAAG
CAATAACGGATGGCTTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRASCALANAELVSYLASLRTLCATFVQYNPDGTLSTGTLFLAVPHKFRIDYHKEGVSVVMNKGMMTYRDATLKESRSFF
LGKSDPLLLAISDLGALHKYKQSISGELLYLGRSSKNKKYVLVLSHSPAEIREILFEDDSKQVTRMVLSDVCYNADLDRH
IFDITESFLPQ

Sequences:

>Translated_171_residues
MRASCALANAELVSYLASLRTLCATFVQYNPDGTLSTGTLFLAVPHKFRIDYHKEGVSVVMNKGMMTYRDATLKESRSFF
LGKSDPLLLAISDLGALHKYKQSISGELLYLGRSSKNKKYVLVLSHSPAEIREILFEDDSKQVTRMVLSDVCYNADLDRH
IFDITESFLPQ
>Mature_171_residues
MRASCALANAELVSYLASLRTLCATFVQYNPDGTLSTGTLFLAVPHKFRIDYHKEGVSVVMNKGMMTYRDATLKESRSFF
LGKSDPLLLAISDLGALHKYKQSISGELLYLGRSSKNKKYVLVLSHSPAEIREILFEDDSKQVTRMVLSDVCYNADLDRH
IFDITESFLPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19220; Mature: 19220

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRASCALANAELVSYLASLRTLCATFVQYNPDGTLSTGTLFLAVPHKFRIDYHKEGVSVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCEEEEEECCCCHHHH
MNKGMMTYRDATLKESRSFFLGKSDPLLLAISDLGALHKYKQSISGELLYLGRSSKNKKY
HHCCCEEECCHHHHHCCCEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCEE
VLVLSHSPAEIREILFEDDSKQVTRMVLSDVCYNADLDRHIFDITESFLPQ
EEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRASCALANAELVSYLASLRTLCATFVQYNPDGTLSTGTLFLAVPHKFRIDYHKEGVSVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEEEEECCEEEEEECCCCHHHH
MNKGMMTYRDATLKESRSFFLGKSDPLLLAISDLGALHKYKQSISGELLYLGRSSKNKKY
HHCCCEEECCHHHHHCCCEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCEE
VLVLSHSPAEIREILFEDDSKQVTRMVLSDVCYNADLDRHIFDITESFLPQ
EEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA