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The map label for this gene is cdsA [H]

Identifier: 88608452

GI number: 88608452

Start: 831656

End: 832273

Strand: Reverse

Name: cdsA [H]

Synonym: NSE_0942

Alternate gene names: 88608452

Gene position: 832273-831656 (Counterclockwise)

Preceding gene: 88608425

Following gene: 88608884

Centisome position: 96.89

GC content: 42.23

Gene sequence:

>618_bases
ATGAAACATTATTGCGATTTGAAGGCCAGGGTTATCTCTGCGGCAGTACTGCTTTTTTTGTGTGCCTTGGCAATCTGCAG
TGGTGGCTATGCTGTATACTCAAGTGTATTACTTTTAGCAGTGCTTTCGTATCAGGAATGGCAGGATATGACAGCGAATA
AGGGGGTTGTGTTAAGATGCCTTGGTTTGTTTGTGGCAATTTTACCCAACGCAGCACTTATAGGTATACATATTGAAGAT
GTAGAGATTCTTATTTGGTTGATAGTTTGTGTTGTAAGTAATGACGTGGGTGCCTATTTTATCGGACGCATCATAGGTGG
TGTTAAACTTTGCAAGAGTGTCAGTCCAAATAAGACCGTAAGTGGTTTCCTTGGAGGACTCCTATCCACCTTTGTTTGCG
GTTCTACTTTTGCAATAGTTCTTGGACTGAGTATGAATTTTGTTCTTTTGACCCTTCCAATTGCTGTTTTGGCGACTATA
GGTGATCTATTTGAATCGTTTATAAAGCGTACGTGCTCAGTGAAGGATAGCGGAACGCTGCTACCAGGACACGGAGGTAT
ACTGGACCGTGTCGATGGATTCATTTTTTCGGCACCCTTCCTGTTCTTTTGTCTTTGA

Upstream 100 bases:

>100_bases
CCGTCCTTATACCTAAACCGGGGTATCAAAGTTAGGTATGTGTTCCTGGTATTTTTTATGTTAACCTTTGGCTGCGGTTT
GCCTATCTAATGGGAGTTCT

Downstream 100 bases:

>100_bases
AATGTGCTGGGTTCTTAGTAGTTTTATTCATATAGAGTGATGCTGCGCATTGCGTTGGTCTGGGGCTTTTGTTTTTCTTA
CCTATTTTCCTCCTGTACCA

Product: putative phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKHYCDLKARVISAAVLLFLCALAICSGGYAVYSSVLLLAVLSYQEWQDMTANKGVVLRCLGLFVAILPNAALIGIHIED
VEILIWLIVCVVSNDVGAYFIGRIIGGVKLCKSVSPNKTVSGFLGGLLSTFVCGSTFAIVLGLSMNFVLLTLPIAVLATI
GDLFESFIKRTCSVKDSGTLLPGHGGILDRVDGFIFSAPFLFFCL

Sequences:

>Translated_205_residues
MKHYCDLKARVISAAVLLFLCALAICSGGYAVYSSVLLLAVLSYQEWQDMTANKGVVLRCLGLFVAILPNAALIGIHIED
VEILIWLIVCVVSNDVGAYFIGRIIGGVKLCKSVSPNKTVSGFLGGLLSTFVCGSTFAIVLGLSMNFVLLTLPIAVLATI
GDLFESFIKRTCSVKDSGTLLPGHGGILDRVDGFIFSAPFLFFCL
>Mature_205_residues
MKHYCDLKARVISAAVLLFLCALAICSGGYAVYSSVLLLAVLSYQEWQDMTANKGVVLRCLGLFVAILPNAALIGIHIED
VEILIWLIVCVVSNDVGAYFIGRIIGGVKLCKSVSPNKTVSGFLGGLLSTFVCGSTFAIVLGLSMNFVLLTLPIAVLATI
GDLFESFIKRTCSVKDSGTLLPGHGGILDRVDGFIFSAPFLFFCL

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=132, Percent_Identity=40.9090909090909, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787677, Length=113, Percent_Identity=40.7079646017699, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 21875; Mature: 21875

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYCDLKARVISAAVLLFLCALAICSGGYAVYSSVLLLAVLSYQEWQDMTANKGVVLRC
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LGLFVAILPNAALIGIHIEDVEILIWLIVCVVSNDVGAYFIGRIIGGVKLCKSVSPNKTV
HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHH
SGFLGGLLSTFVCGSTFAIVLGLSMNFVLLTLPIAVLATIGDLFESFIKRTCSVKDSGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPGHGGILDRVDGFIFSAPFLFFCL
CCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHYCDLKARVISAAVLLFLCALAICSGGYAVYSSVLLLAVLSYQEWQDMTANKGVVLRC
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LGLFVAILPNAALIGIHIEDVEILIWLIVCVVSNDVGAYFIGRIIGGVKLCKSVSPNKTV
HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHH
SGFLGGLLSTFVCGSTFAIVLGLSMNFVLLTLPIAVLATIGDLFESFIKRTCSVKDSGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPGHGGILDRVDGFIFSAPFLFFCL
CCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]