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The map label for this gene is nuoJ

Identifier: 88608358

GI number: 88608358

Start: 8977

End: 9546

Strand: Direct

Name: nuoJ

Synonym: NSE_0010

Alternate gene names: 88608358

Gene position: 8977-9546 (Clockwise)

Preceding gene: 88608802

Following gene: 88608862

Centisome position: 1.05

GC content: 40.88

Gene sequence:

>570_bases
ATGGGCATACTTTGTTTTTCGCTTGTACTGGTTGCAATCTTCTCATCTTTTAGGGTTGTTTCGTGTAGGAATGTTGTGCA
CGCGGTTTTGTACTTAGTCCTTGCCTTTTTTACTTCTTCGGTACTTCTGTTAGTATCTGGCTTGGAAGTTCTCTCGTTAA
TGCTTCTTGTTGTATACGTTGGTGCAATAGCGATCTTGTTCCTGTTTGTTGTCATGATGCTCAATTCAGATGATTTCGAG
AAGGGTATAGGAATGTCCGTAGCAAAGTATGTGGGTTTACTTTTTATGGCCTTGCTTCCGTTTTTTTTGGTTCTGTCTTC
GTATGATGACACACAGCAAGAGCGTGCTTATATAGGCATAAAAGATATAGGTGCAGTGCTTTATACGGATTACGTATATC
TTTTTCATCTTTCGGGAGTAGTGCTTCTACTTGCGATGGTAGCGGCAATCAGTATTGCTTTGCCAAGTAAAAGGGACACT
AAATGCCAGGTGGTTAAAGAGCAAATTTCTAGGTCTTCTGTCGTGAGACTTTTGAACGTGCCTTCAGGAAAAGGTGTAGA
TTACGACTGA

Upstream 100 bases:

>100_bases
CTTCTTACGGAGACCCATACTTATCGCAAGCTTGCTGTATACATATTGCAGTGAGTATACCACACGTGCTAGAAGTACCG
TATCCGCGTGTAAAATATGA

Downstream 100 bases:

>100_bases
CCCCTTCTGCTAAGTCTCAACGGATTGGAATTTGATTTCATATCTTGAGCAACTTTTTGGTTTTGCGTTACCTGGCTGTG
GTTGGTATTTCTAAATCTTC

Product: NADH dehydrogenase I subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MGILCFSLVLVAIFSSFRVVSCRNVVHAVLYLVLAFFTSSVLLLVSGLEVLSLMLLVVYVGAIAILFLFVVMMLNSDDFE
KGIGMSVAKYVGLLFMALLPFFLVLSSYDDTQQERAYIGIKDIGAVLYTDYVYLFHLSGVVLLLAMVAAISIALPSKRDT
KCQVVKEQISRSSVVRLLNVPSGKGVDYD

Sequences:

>Translated_189_residues
MGILCFSLVLVAIFSSFRVVSCRNVVHAVLYLVLAFFTSSVLLLVSGLEVLSLMLLVVYVGAIAILFLFVVMMLNSDDFE
KGIGMSVAKYVGLLFMALLPFFLVLSSYDDTQQERAYIGIKDIGAVLYTDYVYLFHLSGVVLLLAMVAAISIALPSKRDT
KCQVVKEQISRSSVVRLLNVPSGKGVDYD
>Mature_188_residues
GILCFSLVLVAIFSSFRVVSCRNVVHAVLYLVLAFFTSSVLLLVSGLEVLSLMLLVVYVGAIAILFLFVVMMLNSDDFEK
GIGMSVAKYVGLLFMALLPFFLVLSSYDDTQQERAYIGIKDIGAVLYTDYVYLFHLSGVVLLLAMVAAISIALPSKRDTK
CQVVKEQISRSSVVRLLNVPSGKGVDYD

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 20738; Mature: 20607

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILCFSLVLVAIFSSFRVVSCRNVVHAVLYLVLAFFTSSVLLLVSGLEVLSLMLLVVYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAILFLFVVMMLNSDDFEKGIGMSVAKYVGLLFMALLPFFLVLSSYDDTQQERAYIGI
HHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCH
KDIGAVLYTDYVYLFHLSGVVLLLAMVAAISIALPSKRDTKCQVVKEQISRSSVVRLLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PSGKGVDYD
CCCCCCCCC
>Mature Secondary Structure 
GILCFSLVLVAIFSSFRVVSCRNVVHAVLYLVLAFFTSSVLLLVSGLEVLSLMLLVVYV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAILFLFVVMMLNSDDFEKGIGMSVAKYVGLLFMALLPFFLVLSSYDDTQQERAYIGI
HHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCH
KDIGAVLYTDYVYLFHLSGVVLLLAMVAAISIALPSKRDTKCQVVKEQISRSSVVRLLNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PSGKGVDYD
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]