| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is 88608335
Identifier: 88608335
GI number: 88608335
Start: 702873
End: 703850
Strand: Reverse
Name: 88608335
Synonym: NSE_0791
Alternate gene names: NA
Gene position: 703850-702873 (Counterclockwise)
Preceding gene: 88608241
Following gene: 88608466
Centisome position: 81.94
GC content: 46.52
Gene sequence:
>978_bases TTGAGTGGTTTTTCTATTTTTTCTGTTTATCTCATGCAAAAAGTAAATATTAAGATGCTGCAAAAGTCCATTTTGTGCGG CTTTAGGGGAATAACCAATTTCTTCATCGGTGCCATTGTTGCGAGTAATGGTGCTGTTATCAGATCTGCCGTGCCTGGAG GTGGATCAGGACCTCAAAAAAAACGTGAGGGACTCTATGCAATGTATAACAATTTCGTCCCAACGCTGGAAGTGTTGGTG TGTATGGGCGTTATATGTGTCTTGCTAGAGCGTCTCGCCTTCAAGAAGGCTATCACTAATCCGTGGGCGAGAGTAGCGAC CGCAGTGGTAATTTGTATGGCGCTCATGATGCTGATCTGCACCTTGCTTAGGGTACTTGATAGGCGTAGGGACTGTTGTG CGGACTATGACTATGATCAATCCTTTAACAGGATGGGTGGTTATGGCATGCACTTTAACATTCCTGGTCATGTGGAAAGC AGGAACATGTTGTGTAAGCTTGTTCCTGGCATGAGGTTGTCAAGATTTTTTGCGTTCGATAGGCATGTTCCTGAGCCGGA AGAGCATAGTTGTCCGGTTGTTACTCCTGGGGAAAAAGCCTTGCACTGTCTTGGTGCATTGCTTTCTGTGCCGTTTTGGG TTGCGATGCTTGCACTGAACATTATTGAATTACCTATTGCTGTTATCATTGATAGTCTTGCTTTATGTACTCGTAACGGG CGAGAATATCCTTTTGGTGGTTCTCGTGATGTTGTGTGCCAAGCAATATATAGTTTTTATCAACTGATCGAGCCAGTTAC CTGCGTTTTACCAGAGGGTATGCAAAGAGGCATTGGCGCGGGCTTTGGTGCTGTTGTGCGAAGAGTCTTGGGTATGCCTG GTGAAGGGCGTCGCACAGGAGAAAGAGAGCCTGGGTGCCAATTAGAGAGCGCGGAGGTGCTTCAAGAAGCTGAAGGAAGG TGCTCGAGCTGCGCATGA
Upstream 100 bases:
>100_bases TTTCTGGCCATATAAAGAAAATGGCTTAACCTTGGGTCGTTGTGTGATGTGCTAGCTGTCTCCTAATTTTGTTGGAGAGG TCCGTTGGTTGTGCTTTTAG
Downstream 100 bases:
>100_bases TGGTTTTCCTTTCCTGCCATTAGTTTGTGTGAGACTATTCCTCCTTGCGGCCACTTATTGTTGGGCGTGTGATCGGTGGT GTCGGGTCCAGCCGTTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQKKREGLYAMYNNFVPTLEVLV CMGVICVLLERLAFKKAITNPWARVATAVVICMALMMLICTLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVES RNMLCKLVPGMRLSRFFAFDRHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNG REYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTGEREPGCQLESAEVLQEAEGR CSSCA
Sequences:
>Translated_325_residues MSGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQKKREGLYAMYNNFVPTLEVLV CMGVICVLLERLAFKKAITNPWARVATAVVICMALMMLICTLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVES RNMLCKLVPGMRLSRFFAFDRHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNG REYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTGEREPGCQLESAEVLQEAEGR CSSCA >Mature_324_residues SGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQKKREGLYAMYNNFVPTLEVLVC MGVICVLLERLAFKKAITNPWARVATAVVICMALMMLICTLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVESR NMLCKLVPGMRLSRFFAFDRHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNGR EYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTGEREPGCQLESAEVLQEAEGRC SSCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35679; Mature: 35547
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH KREGLYAMYNNFVPTLEVLVCMGVICVLLERLAFKKAITNPWARVATAVVICMALMMLIC HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVESRNMLCKLVPGMRLSRFFAFD HHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHH RHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC REYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCC EREPGCQLESAEVLQEAEGRCSSCA CCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGFSIFSVYLMQKVNIKMLQKSILCGFRGITNFFIGAIVASNGAVIRSAVPGGGSGPQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH KREGLYAMYNNFVPTLEVLVCMGVICVLLERLAFKKAITNPWARVATAVVICMALMMLIC HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLLRVLDRRRDCCADYDYDQSFNRMGGYGMHFNIPGHVESRNMLCKLVPGMRLSRFFAFD HHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHH RHVPEPEEHSCPVVTPGEKALHCLGALLSVPFWVAMLALNIIELPIAVIIDSLALCTRNG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC REYPFGGSRDVVCQAIYSFYQLIEPVTCVLPEGMQRGIGAGFGAVVRRVLGMPGEGRRTG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCC EREPGCQLESAEVLQEAEGRCSSCA CCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA