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The map label for this gene is rplR

Identifier: 88608283

GI number: 88608283

Start: 231475

End: 231828

Strand: Direct

Name: rplR

Synonym: NSE_0282

Alternate gene names: NA

Gene position: 231475-231828 (Clockwise)

Preceding gene: 88608312

Following gene: 88608248

Centisome position: 26.95

GC content: 43.5

Gene sequence:

>354_bases
ATGTATTTAAGGTTAAATAGGCGTGATAAGCGTGCCTTCAGGGTTCACTATCGGAAAAGGGGGAAGCTACCTTTGCGTCT
TGTTGTCTCAAGAAAGAACCGCAATTTTCACGCGCAAATTATAGATGATACAAGTGCAAGCACGGTGTATCATGTTTCCA
CCCTGAGCAAGGATTTTGTAAGAAAGGGAGGGGTCCTTAATTCATCTGTTGTGGCGGAGTTGGCTGAATATTTCGTGTCC
AGGATACCAGAATCTTTGAAAGGATCTAAGGTTGTATTTGATAGTGGTGCTTCTGCCTACCATGGATTAGTGGCGCTTTT
TGCGGAAAAGGTAAGGGCGTGTTTAGAGTTTTGA

Upstream 100 bases:

>100_bases
AGGAGGTACGATCCTTACAAGGGAAAGGGAATTTTTCCGAGTGATGTTGTAATGCCTAGGAAAGAGGCGAAGAAAAAGTA
GTGATTGTTTCGTATTGTCA

Downstream 100 bases:

>100_bases
GGTCTTTTGTCAGAAAATGAAAAACGTCGATCATAGAAATTTAGATCTTTTCGAGAGCGTTGTTGACATAGCAAGAGTAA
GTAAAGTTACGAAAGGTGGT

Product: 50S ribosomal protein L18

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MYLRLNRRDKRAFRVHYRKRGKLPLRLVVSRKNRNFHAQIIDDTSASTVYHVSTLSKDFVRKGGVLNSSVVAELAEYFVS
RIPESLKGSKVVFDSGASAYHGLVALFAEKVRACLEF

Sequences:

>Translated_117_residues
MYLRLNRRDKRAFRVHYRKRGKLPLRLVVSRKNRNFHAQIIDDTSASTVYHVSTLSKDFVRKGGVLNSSVVAELAEYFVS
RIPESLKGSKVVFDSGASAYHGLVALFAEKVRACLEF
>Mature_117_residues
MYLRLNRRDKRAFRVHYRKRGKLPLRLVVSRKNRNFHAQIIDDTSASTVYHVSTLSKDFVRKGGVLNSSVVAELAEYFVS
RIPESLKGSKVVFDSGASAYHGLVALFAEKVRACLEF

Specific function: Unknown

COG id: COG0256

COG function: function code J; Ribosomal protein L18

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13318; Mature: 13318

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRLNRRDKRAFRVHYRKRGKLPLRLVVSRKNRNFHAQIIDDTSASTVYHVSTLSKDFV
CEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEHHHHHHHHH
RKGGVLNSSVVAELAEYFVSRIPESLKGSKVVFDSGASAYHGLVALFAEKVRACLEF
HCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYLRLNRRDKRAFRVHYRKRGKLPLRLVVSRKNRNFHAQIIDDTSASTVYHVSTLSKDFV
CEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEHHHHHHHHH
RKGGVLNSSVVAELAEYFVSRIPESLKGSKVVFDSGASAYHGLVALFAEKVRACLEF
HCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA