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The map label for this gene is 88608227

Identifier: 88608227

GI number: 88608227

Start: 786737

End: 787162

Strand: Reverse

Name: 88608227

Synonym: NSE_0880

Alternate gene names: NA

Gene position: 787162-786737 (Counterclockwise)

Preceding gene: 88608209

Following gene: 88608499

Centisome position: 91.64

GC content: 40.85

Gene sequence:

>426_bases
ATGCCAAGTGAGAAAAGGGTTGCCAGATTACTGTCTATTGAAGTGTGCTACTCAAGTTATTTTTCTGATTTGCCGCAATC
GGAGCTTATTAGTAGGGCCTTGGAGCTGCAAGAGATGCCCTATATGAAGCGATATGATCTTGAGTTACTCAATTCTATCT
TGGATTTATGTCTCGCTAATGTAGAAGCGGATACAGAGCTTATAGGACGCTTCTTATCTGAAGAGTGGGAGATAAATAGA
ATAGATAATCTCAAGTTATCGCTTTTGAGGGTTGCCATATCTGAACTACGACTAAGCAGTGTTGGGCAAAGAAATCTTGT
CATTAACGAATATGTAAGCTTGGGAGGACTCTTTCTGTCAGTAAAGGAGGTTGGTTTTGTCAACGCAATACTGGAGAAGC
TGGCAAGCGAAATTCAAGGAAAGTAG

Upstream 100 bases:

>100_bases
AATGTTGTTGGACTTCCAGCATATGAAGTTATCTCACTTTTAAGGTCTGTAGGTGTATTTCAGCAGAGTAGGGAAGCTCT
CTACTCACAAGGAGTAAAAG

Downstream 100 bases:

>100_bases
ATAAAGTTTTATCTGGAGGCTGACTGCTCTGTTTGTTGCTTAGGATCAATTCCACGTTGTACAGTTGGACCTGCGAGATC
TGTAACAGGGTGTCTTTCTT

Product: putative N utilization substance protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPSEKRVARLLSIEVCYSSYFSDLPQSELISRALELQEMPYMKRYDLELLNSILDLCLANVEADTELIGRFLSEEWEINR
IDNLKLSLLRVAISELRLSSVGQRNLVINEYVSLGGLFLSVKEVGFVNAILEKLASEIQGK

Sequences:

>Translated_141_residues
MPSEKRVARLLSIEVCYSSYFSDLPQSELISRALELQEMPYMKRYDLELLNSILDLCLANVEADTELIGRFLSEEWEINR
IDNLKLSLLRVAISELRLSSVGQRNLVINEYVSLGGLFLSVKEVGFVNAILEKLASEIQGK
>Mature_140_residues
PSEKRVARLLSIEVCYSSYFSDLPQSELISRALELQEMPYMKRYDLELLNSILDLCLANVEADTELIGRFLSEEWEINRI
DNLKLSLLRVAISELRLSSVGQRNLVINEYVSLGGLFLSVKEVGFVNAILEKLASEIQGK

Specific function: Unknown

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16027; Mature: 15896

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSEKRVARLLSIEVCYSSYFSDLPQSELISRALELQEMPYMKRYDLELLNSILDLCLAN
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
VEADTELIGRFLSEEWEINRIDNLKLSLLRVAISELRLSSVGQRNLVINEYVSLGGLFLS
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VKEVGFVNAILEKLASEIQGK
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSEKRVARLLSIEVCYSSYFSDLPQSELISRALELQEMPYMKRYDLELLNSILDLCLAN
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
VEADTELIGRFLSEEWEINRIDNLKLSLLRVAISELRLSSVGQRNLVINEYVSLGGLFLS
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VKEVGFVNAILEKLASEIQGK
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA