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The map label for this gene is 88608127

Identifier: 88608127

GI number: 88608127

Start: 482826

End: 483344

Strand: Reverse

Name: 88608127

Synonym: NSE_0554

Alternate gene names: NA

Gene position: 483344-482826 (Counterclockwise)

Preceding gene: 88608621

Following gene: 88608269

Centisome position: 56.27

GC content: 38.54

Gene sequence:

>519_bases
GTGATCGAAAAAAAAGTTATTTTTGACATTGATACAAAGAACCTCAACGAAGAAGGTGTTTTTTATGGCTATGCTAGTGT
CTTTGATGTAGTTGATGAGCAAGGAGATATTATCAGTAGTGGTGCTTTTGACTTGACGAAGTGTGTACCACTTTTGTGGC
AACACAGGCAAGATCAACCTATTGGGAAAGTTCTTGAAATGCAGGAAACTGAGAAAGGACTTTATTTAAAAGGTCATATA
ATTATGGAGGTGAATCAGGGGTATGAAGCGTATAAGCTGCTCAAGGCAGGAGTGCTAAACGGGCTGTCAATTGGATACAT
ACCAAAAAAGTATAAGATGGATAAGCACACAGGAGCGAGAGTTATGACAGCTGTGAAACTCATAGAGGTAAGCCTCGTGA
CCTTTCCAGCAAACAAGTATGCAAGGGTAAGCTCCGTGAAAAGTCAATATGATGCGGATCAGTTACTAGAAGCAAGATTA
GTAAGACTAATAGAAATAATGAGAAAGGAATTTACTTAA

Upstream 100 bases:

>100_bases
AAGGTGTTAGTCGCGACCTATAGGAATCCAACTTATGTGATTTGCTTACCTTGAGAAAGCTCTTCTATTAAAATGATTCT
TTTCCCATATACGTGCAATT

Downstream 100 bases:

>100_bases
AATTTTACTATTCCTTTATGGATATCCCCTTGACTGTTGCGCTTTCCTCAAAAGGGTATCAACAGTGCCTATTAATCATC
TGAGAATAGGGACAGATCAT

Product: HK97 family phage prohead protease

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; Phage Head Protein/Prohead Proteinase; Phage-Related Protein; Phage Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Phage Pro-Head Protease; Prophage LambdaSa2 Protease

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MIEKKVIFDIDTKNLNEEGVFYGYASVFDVVDEQGDIISSGAFDLTKCVPLLWQHRQDQPIGKVLEMQETEKGLYLKGHI
IMEVNQGYEAYKLLKAGVLNGLSIGYIPKKYKMDKHTGARVMTAVKLIEVSLVTFPANKYARVSSVKSQYDADQLLEARL
VRLIEIMRKEFT

Sequences:

>Translated_172_residues
MIEKKVIFDIDTKNLNEEGVFYGYASVFDVVDEQGDIISSGAFDLTKCVPLLWQHRQDQPIGKVLEMQETEKGLYLKGHI
IMEVNQGYEAYKLLKAGVLNGLSIGYIPKKYKMDKHTGARVMTAVKLIEVSLVTFPANKYARVSSVKSQYDADQLLEARL
VRLIEIMRKEFT
>Mature_172_residues
MIEKKVIFDIDTKNLNEEGVFYGYASVFDVVDEQGDIISSGAFDLTKCVPLLWQHRQDQPIGKVLEMQETEKGLYLKGHI
IMEVNQGYEAYKLLKAGVLNGLSIGYIPKKYKMDKHTGARVMTAVKLIEVSLVTFPANKYARVSSVKSQYDADQLLEARL
VRLIEIMRKEFT

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19568; Mature: 19568

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKKVIFDIDTKNLNEEGVFYGYASVFDVVDEQGDIISSGAFDLTKCVPLLWQHRQDQP
CCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCC
IGKVLEMQETEKGLYLKGHIIMEVNQGYEAYKLLKAGVLNGLSIGYIPKKYKMDKHTGAR
HHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHH
VMTAVKLIEVSLVTFPANKYARVSSVKSQYDADQLLEARLVRLIEIMRKEFT
HHHHHHHHHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEKKVIFDIDTKNLNEEGVFYGYASVFDVVDEQGDIISSGAFDLTKCVPLLWQHRQDQP
CCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCCCCC
IGKVLEMQETEKGLYLKGHIIMEVNQGYEAYKLLKAGVLNGLSIGYIPKKYKMDKHTGAR
HHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHH
VMTAVKLIEVSLVTFPANKYARVSSVKSQYDADQLLEARLVRLIEIMRKEFT
HHHHHHHHHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA