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The map label for this gene is 88608100

Identifier: 88608100

GI number: 88608100

Start: 129456

End: 130067

Strand: Reverse

Name: 88608100

Synonym: NSE_0161

Alternate gene names: NA

Gene position: 130067-129456 (Counterclockwise)

Preceding gene: 88608112

Following gene: 88608197

Centisome position: 15.14

GC content: 41.01

Gene sequence:

>612_bases
ATGTTTCGTGGCAAGTCGTCAATAGTACTATTAGCATTCTTATTGATCAACTTTTTTCAGCTACTTCTCTACAAACAGAT
CTTAAACTGCTCAATGGACGGACCGTTGCTTTGGATAACCACAAACATCCTACATCTAGTCTCAGTGAGCGGAATTTTTT
CACAATATTGGGCTACTGGAAGCCTAGAGCAACTCGTTACGTTTACCCCAGGCATCAGGAGCTTTATAGTAAAGACCGTC
TTAGGATTATGGATTAGACAAGGTCTTTTATTAACACTCCTGGCTACAGGTTTGTTTTATCTTCTAAGCACCGACAAAAT
ACACACCCCGACTATAATTTTATTTGCTGGTTCACTTTGCTACTCGACAGGAATGCTATCCTTCACTGGTGCGCTGTGCA
GTAGTTTAAGTATTCGCTCGGATCGAATCACACCCATTATTCTTGCCGCACCAATCTCGATTCCCGGAATCGTAACAGCA
CTTGCACTTTTAAAGTGGGGTATAAACAGTCCAGGGATTTTCTCAGCGTTATTTTTTGGAAACGTGATTGCAGTGCTGTT
ATCCCCACTAGTGATGGAAATTGCACTAAAAGAAACTCTGGAAAACTTATAA

Upstream 100 bases:

>100_bases
ACATCGGGTAAAAGAAAAAAAAAGCCACACCGGCAGAACTCTAACATCATAAACTTAAATAACTATTATGTTATACTTGC
TACCAAAGAGAGAACCTTAT

Downstream 100 bases:

>100_bases
GCCAAAGGCACAAACATCCAAAACAGATACCTGATGGATAACATTCATCATGCGGGCACGACAGAGCGCATAAAAAGACG
TGCGGTCGAGAAGACTTGAA

Product: CcmB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MFRGKSSIVLLAFLLINFFQLLLYKQILNCSMDGPLLWITTNILHLVSVSGIFSQYWATGSLEQLVTFTPGIRSFIVKTV
LGLWIRQGLLLTLLATGLFYLLSTDKIHTPTIILFAGSLCYSTGMLSFTGALCSSLSIRSDRITPIILAAPISIPGIVTA
LALLKWGINSPGIFSALFFGNVIAVLLSPLVMEIALKETLENL

Sequences:

>Translated_203_residues
MFRGKSSIVLLAFLLINFFQLLLYKQILNCSMDGPLLWITTNILHLVSVSGIFSQYWATGSLEQLVTFTPGIRSFIVKTV
LGLWIRQGLLLTLLATGLFYLLSTDKIHTPTIILFAGSLCYSTGMLSFTGALCSSLSIRSDRITPIILAAPISIPGIVTA
LALLKWGINSPGIFSALFFGNVIAVLLSPLVMEIALKETLENL
>Mature_203_residues
MFRGKSSIVLLAFLLINFFQLLLYKQILNCSMDGPLLWITTNILHLVSVSGIFSQYWATGSLEQLVTFTPGIRSFIVKTV
LGLWIRQGLLLTLLATGLFYLLSTDKIHTPTIILFAGSLCYSTGMLSFTGALCSSLSIRSDRITPIILAAPISIPGIVTA
LALLKWGINSPGIFSALFFGNVIAVLLSPLVMEIALKETLENL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22140; Mature: 22140

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGKSSIVLLAFLLINFFQLLLYKQILNCSMDGPLLWITTNILHLVSVSGIFSQYWATG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC
SLEQLVTFTPGIRSFIVKTVLGLWIRQGLLLTLLATGLFYLLSTDKIHTPTIILFAGSLC
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHH
YSTGMLSFTGALCSSLSIRSDRITPIILAAPISIPGIVTALALLKWGINSPGIFSALFFG
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
NVIAVLLSPLVMEIALKETLENL
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRGKSSIVLLAFLLINFFQLLLYKQILNCSMDGPLLWITTNILHLVSVSGIFSQYWATG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCC
SLEQLVTFTPGIRSFIVKTVLGLWIRQGLLLTLLATGLFYLLSTDKIHTPTIILFAGSLC
CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHH
YSTGMLSFTGALCSSLSIRSDRITPIILAAPISIPGIVTALALLKWGINSPGIFSALFFG
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
NVIAVLLSPLVMEIALKETLENL
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA