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The map label for this gene is yqhO [H]

Identifier: 88608035

GI number: 88608035

Start: 775861

End: 776952

Strand: Reverse

Name: yqhO [H]

Synonym: NSE_0866

Alternate gene names: 88608035

Gene position: 776952-775861 (Counterclockwise)

Preceding gene: 88608848

Following gene: 88608377

Centisome position: 90.45

GC content: 43.13

Gene sequence:

>1092_bases
GTGTTATACAAAAATTTAGTCTTTAAAGGTGGTGGCGTAAAGGTTCTTTACAGTGTTGGGGCTATGGAAGCCCTAGAAGA
GCGTGACGTCCTACATTCCATAGAACGGGTTGCTGGTGTTTCATCAGGGGCTGTGCTAGCACTTCTTACGGCTATAGGTA
TGGATGTGAAAGAGATGAGAGATTTTTTTCTCGAGATCCCTTTTGCAGAGGAAGTAGATGCAGTGTGTTTGCCTGAAGAG
ACCAACAGGTTTTTTGAAGAGTATGGTAGATATACTGGTGATAAGTTGCTTGGGCGGTTGCGTGACCTACTAGAAGAGAA
GTGTGGTAGTTCGGACATTACCTTTGCCGAGATGCATGATCTTGGTTTTAGGGATCTCTATGTCTTTGCTACAGATGTTA
CGAACAAGAAACTTGTGCAATACTCGTGGGAGGATACGCCGGATTACAGTGTTGTGGATGCTGTAAGAGCTTCTGCTTCT
TATCCGTTCTATTTTGTTCCATGTCGTGGGCCAAATGGAGAACTTTTAGTCGATGGAGGTCTGCTGGATAACTATCCACT
TTGGCTTTTCGATCAACCTCAATTCCTTTCCAATCCAGATGCCAAGTACAATGAGGAAACCCTTGCTATCCATATAGGTA
CATGTGAAGAGCAGCAGACCCTGTGGTCGCATAAAGATTTGGTCTTCATGATGCAATTGTTCAACGATATGCATGCTGAC
ACAATTTTCGAGAAGGTTAAAGATTTAGATTTTTCTCAAGTGGCTTCTAAGGCTGATGCATACCATGACCTGCTTGGGTA
CCTGATATGCATTTTTGATGCTGGTAAGCTTGCTCCACCTAGGTATCATCATCCTAATTTTGCGGGAGAGATTAGTATCG
ATACAAATTTTGTTAGTTCGAACGGTAGGGTATTAACCACTTTTGATCTTGATCTCAGTGAAGAAGTTCGCTGTGAGCTC
ATGGACCACGGAAGAAAGGAAGCACACAAATTTTTTGAGAAAGAGTGTCTCCTCGGAACGGAGTTTTGTTATCCGTTAGG
AGATCCTGCACAACATGATCTGTTGTCGGGTGTTGGCTCAGAATTAGTATAG

Upstream 100 bases:

>100_bases
TGGTCCAAGGTGGCTTTATTGGGTCGATGTTTCGTTTTTGTCTGCTCCCGACAAAAAAAAGTGCTTCCTTTTATGAATAT
TGAGAAAATATACTGGTGCT

Downstream 100 bases:

>100_bases
TAGATTGAGGATTAGATATCTATTCCCAAATATACTAACGTGTAAGTACCGACTGAATACATTGCACAGTATCAGGCTAG
TTGTTATATGTTACGCTTTT

Product: patatin-like phospholipase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLYKNLVFKGGGVKVLYSVGAMEALEERDVLHSIERVAGVSSGAVLALLTAIGMDVKEMRDFFLEIPFAEEVDAVCLPEE
TNRFFEEYGRYTGDKLLGRLRDLLEEKCGSSDITFAEMHDLGFRDLYVFATDVTNKKLVQYSWEDTPDYSVVDAVRASAS
YPFYFVPCRGPNGELLVDGGLLDNYPLWLFDQPQFLSNPDAKYNEETLAIHIGTCEEQQTLWSHKDLVFMMQLFNDMHAD
TIFEKVKDLDFSQVASKADAYHDLLGYLICIFDAGKLAPPRYHHPNFAGEISIDTNFVSSNGRVLTTFDLDLSEEVRCEL
MDHGRKEAHKFFEKECLLGTEFCYPLGDPAQHDLLSGVGSELV

Sequences:

>Translated_363_residues
MLYKNLVFKGGGVKVLYSVGAMEALEERDVLHSIERVAGVSSGAVLALLTAIGMDVKEMRDFFLEIPFAEEVDAVCLPEE
TNRFFEEYGRYTGDKLLGRLRDLLEEKCGSSDITFAEMHDLGFRDLYVFATDVTNKKLVQYSWEDTPDYSVVDAVRASAS
YPFYFVPCRGPNGELLVDGGLLDNYPLWLFDQPQFLSNPDAKYNEETLAIHIGTCEEQQTLWSHKDLVFMMQLFNDMHAD
TIFEKVKDLDFSQVASKADAYHDLLGYLICIFDAGKLAPPRYHHPNFAGEISIDTNFVSSNGRVLTTFDLDLSEEVRCEL
MDHGRKEAHKFFEKECLLGTEFCYPLGDPAQHDLLSGVGSELV
>Mature_363_residues
MLYKNLVFKGGGVKVLYSVGAMEALEERDVLHSIERVAGVSSGAVLALLTAIGMDVKEMRDFFLEIPFAEEVDAVCLPEE
TNRFFEEYGRYTGDKLLGRLRDLLEEKCGSSDITFAEMHDLGFRDLYVFATDVTNKKLVQYSWEDTPDYSVVDAVRASAS
YPFYFVPCRGPNGELLVDGGLLDNYPLWLFDQPQFLSNPDAKYNEETLAIHIGTCEEQQTLWSHKDLVFMMQLFNDMHAD
TIFEKVKDLDFSQVASKADAYHDLLGYLICIFDAGKLAPPRYHHPNFAGEISIDTNFVSSNGRVLTTFDLDLSEEVRCEL
MDHGRKEAHKFFEKECLLGTEFCYPLGDPAQHDLLSGVGSELV

Specific function: Probable lipid hydrolase [H]

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 40995; Mature: 40995

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYKNLVFKGGGVKVLYSVGAMEALEERDVLHSIERVAGVSSGAVLALLTAIGMDVKEMR
CCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
DFFLEIPFAEEVDAVCLPEETNRFFEEYGRYTGDKLLGRLRDLLEEKCGSSDITFAEMHD
HHHEECCCHHCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHC
LGFRDLYVFATDVTNKKLVQYSWEDTPDYSVVDAVRASASYPFYFVPCRGPNGELLVDGG
CCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECC
LLDNYPLWLFDQPQFLSNPDAKYNEETLAIHIGTCEEQQTLWSHKDLVFMMQLFNDMHAD
CCCCCCEEEECCCHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TIFEKVKDLDFSQVASKADAYHDLLGYLICIFDAGKLAPPRYHHPNFAGEISIDTNFVSS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEEECC
NGRVLTTFDLDLSEEVRCELMDHGRKEAHKFFEKECLLGTEFCYPLGDPAQHDLLSGVGS
CCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHH
ELV
CCC
>Mature Secondary Structure
MLYKNLVFKGGGVKVLYSVGAMEALEERDVLHSIERVAGVSSGAVLALLTAIGMDVKEMR
CCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHH
DFFLEIPFAEEVDAVCLPEETNRFFEEYGRYTGDKLLGRLRDLLEEKCGSSDITFAEMHD
HHHEECCCHHCCCCEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHC
LGFRDLYVFATDVTNKKLVQYSWEDTPDYSVVDAVRASASYPFYFVPCRGPNGELLVDGG
CCCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECC
LLDNYPLWLFDQPQFLSNPDAKYNEETLAIHIGTCEEQQTLWSHKDLVFMMQLFNDMHAD
CCCCCCEEEECCCHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TIFEKVKDLDFSQVASKADAYHDLLGYLICIFDAGKLAPPRYHHPNFAGEISIDTNFVSS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEEECC
NGRVLTTFDLDLSEEVRCELMDHGRKEAHKFFEKECLLGTEFCYPLGDPAQHDLLSGVGS
CCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHH
ELV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]