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The map label for this gene is atpC

Identifier: 88608001

GI number: 88608001

Start: 678708

End: 679043

Strand: Reverse

Name: atpC

Synonym: NSE_0762

Alternate gene names: NA

Gene position: 679043-678708 (Counterclockwise)

Preceding gene: 88608676

Following gene: 88608738

Centisome position: 79.05

GC content: 41.07

Gene sequence:

>336_bases
ATGTCCACTTTTGAGCTTGGTATTTTTACTCCTCTTGAGTGCAGAAAGTTACACGTCGTGAGTTTAGGGGGTGATACAGA
TAGTGGGAGATTCGTTGTTCTTGCAGGACACGAACCGTCTGTTTTTGCATTGAAAAATGGACTTATCTTTCTGGTTCTTG
CTGATGGGATAAAGAAGAAATTTTTTGTAGAGGGTGCAGTTCTAAGGATCCAAGATAAAACATATGTGCTAACAGCCGAG
ACTATACTGGATATCGAGCTGGTGGACGAAGAATTTTTAAAACGTTACCACGATGCTGAAGTAGTTGCTCGTGTAATTAA
GCAAATGGAGGCCTGA

Upstream 100 bases:

>100_bases
AGTTGAGGGCAAATGTGATGATATGCCTGAAGCTGCTTTTTATATGGTTGGTAACATGAACGAGGCGAGAGAAAAGGCCA
TTAGTCTAAGGGAGAAATAG

Downstream 100 bases:

>100_bases
TGTATGTTCTTTATTGATTCAGCAAATTTAGAAGAGATAAGGTCAGCTGTGGAGCTGGGTCTGGTGAGTGGTGTGACGAC
TAATCCAACCCTTATTAGTA

Product: ATP synthase F1 subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSTFELGIFTPLECRKLHVVSLGGDTDSGRFVVLAGHEPSVFALKNGLIFLVLADGIKKKFFVEGAVLRIQDKTYVLTAE
TILDIELVDEEFLKRYHDAEVVARVIKQMEA

Sequences:

>Translated_111_residues
MSTFELGIFTPLECRKLHVVSLGGDTDSGRFVVLAGHEPSVFALKNGLIFLVLADGIKKKFFVEGAVLRIQDKTYVLTAE
TILDIELVDEEFLKRYHDAEVVARVIKQMEA
>Mature_110_residues
STFELGIFTPLECRKLHVVSLGGDTDSGRFVVLAGHEPSVFALKNGLIFLVLADGIKKKFFVEGAVLRIQDKTYVLTAET
ILDIELVDEEFLKRYHDAEVVARVIKQMEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12412; Mature: 12280

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFELGIFTPLECRKLHVVSLGGDTDSGRFVVLAGHEPSVFALKNGLIFLVLADGIKKK
CCEEECEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCEEEEEEECCCCEE
FFVEGAVLRIQDKTYVLTAETILDIELVDEEFLKRYHDAEVVARVIKQMEA
EEECCEEEEEECCEEEEEEHHEEEEEECCHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
STFELGIFTPLECRKLHVVSLGGDTDSGRFVVLAGHEPSVFALKNGLIFLVLADGIKKK
CEEECEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCEEEEEEECCCCEE
FFVEGAVLRIQDKTYVLTAETILDIELVDEEFLKRYHDAEVVARVIKQMEA
EEECCEEEEEECCEEEEEEHHEEEEEECCHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA