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The map label for this gene is fdxB [H]

Identifier: 88607985

GI number: 88607985

Start: 241441

End: 241776

Strand: Reverse

Name: fdxB [H]

Synonym: NSE_0297

Alternate gene names: 88607985

Gene position: 241776-241441 (Counterclockwise)

Preceding gene: 88608318

Following gene: 88608295

Centisome position: 28.15

GC content: 43.75

Gene sequence:

>336_bases
ATGTCGAAGGAGCTAAAAATAACTTTCATTGAACCAGATGGAAAAGAGCGTCATTGCACTGCTCACGAAGGAGAAACCAT
TCTCACGGTGGCACATAAAAACGGTATTGACTTAGAAGGTGCATGTGAAGGTTCTCTTGCGTGTTCTACTTGTCACGTGA
TAGTTGAATCACAATGGTTTGACAAGCTGCCTCCTATCTCTGCCGATGAAGATGACATGCTAGACCTTGCATTTGGACTT
TCTGCTACGTCAAGGTTAGGTTGCCAAGTTGTGATGCGTGAGTCCATAGATGGGATCAAAGTAAGGCTCCCAAGCGCAAC
AAGAAACATAAAGTAA

Upstream 100 bases:

>100_bases
AAAGCAACTGAGGGACTAGAACGAGTTGCAGAACCGTTCCTGAAGCGAAGACTAGACTTTCTTTTTAAGAAAATGGAAAT
AGACCTGAATAAAACCTGAT

Downstream 100 bases:

>100_bases
GAGTTTATTTACCGAAACATGGATAAGGCGCGCTTTTTTCTCTACTGCTGCTTATTTGTTGTACTTTTGGCTTTTTGTGT
CACGGGATATTGGTTCTATA

Product: iron-sulfur cluster binding protein

Products: NA

Alternate protein names: Adrenodoxin-like protein [H]

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSKELKITFIEPDGKERHCTAHEGETILTVAHKNGIDLEGACEGSLACSTCHVIVESQWFDKLPPISADEDDMLDLAFGL
SATSRLGCQVVMRESIDGIKVRLPSATRNIK

Sequences:

>Translated_111_residues
MSKELKITFIEPDGKERHCTAHEGETILTVAHKNGIDLEGACEGSLACSTCHVIVESQWFDKLPPISADEDDMLDLAFGL
SATSRLGCQVVMRESIDGIKVRLPSATRNIK
>Mature_110_residues
SKELKITFIEPDGKERHCTAHEGETILTVAHKNGIDLEGACEGSLACSTCHVIVESQWFDKLPPISADEDDMLDLAFGLS
ATSRLGCQVVMRESIDGIKVRLPSATRNIK

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=106, Percent_Identity=45.2830188679245, Blast_Score=102, Evalue=5e-23,
Organism=Homo sapiens, GI4758352, Length=103, Percent_Identity=44.6601941747573, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1788874, Length=89, Percent_Identity=51.685393258427, Blast_Score=81, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17544202, Length=106, Percent_Identity=49.0566037735849, Blast_Score=113, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325004, Length=109, Percent_Identity=57.7981651376147, Blast_Score=133, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24661503, Length=106, Percent_Identity=45.2830188679245, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI281365644, Length=110, Percent_Identity=41.8181818181818, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12128; Mature: 11997

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKELKITFIEPDGKERHCTAHEGETILTVAHKNGIDLEGACEGSLACSTCHVIVESQWF
CCCCEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCC
DKLPPISADEDDMLDLAFGLSATSRLGCQVVMRESIDGIKVRLPSATRNIK
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SKELKITFIEPDGKERHCTAHEGETILTVAHKNGIDLEGACEGSLACSTCHVIVESQWF
CCCEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCC
DKLPPISADEDDMLDLAFGLSATSRLGCQVVMRESIDGIKVRLPSATRNIK
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA