Click here to switch to the map view.

The map label for this gene is 88607968

Identifier: 88607968

GI number: 88607968

Start: 650089

End: 650205

Strand: Reverse

Name: 88607968

Synonym: NSE_0728

Alternate gene names: NA

Gene position: 650205-650089 (Counterclockwise)

Preceding gene: 88608804

Following gene: 88608212

Centisome position: 75.69

GC content: 42.74

Gene sequence:

>117_bases
TTGGTCCTGCGTCTAATCTCTGTAAGGGGGTGTAATGCTTTACATAGTTTTTGGCTTGGTCTTGTTGGTGATCTTTTGTG
CACTGGGATCATTTTTTTTTCCTCGTGTTGGTCGTGA

Upstream 100 bases:

>100_bases
ATCAGTCTAGGGAATTTGTAAAGTTTCTTTTCTTGGGAGAGGTCAATTATAGCGAACTTGGGTTTTACAAGGGAGCATAG
TACTTTGTGTAGTTTGTGAT

Downstream 100 bases:

>100_bases
AGAGGAATTTTCTGGTACAGTTGAAGACGATGAACACAAAGAGTACCACAAGGAGAAGCAGCGCAGAATAAAAGATCAAT
ACTACAGAAGCATAGACTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MVLRLISVRGCNALHSFWLGLVGDLLCTGIIFFSSCWS

Sequences:

>Translated_38_residues
MVLRLISVRGCNALHSFWLGLVGDLLCTGIIFFSSCWS
>Mature_38_residues
MVLRLISVRGCNALHSFWLGLVGDLLCTGIIFFSSCWS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4216; Mature: 4216

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
10.5 %Cys+Met (Translated Protein)
7.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
10.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLRLISVRGCNALHSFWLGLVGDLLCTGIIFFSSCWS
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLRLISVRGCNALHSFWLGLVGDLLCTGIIFFSSCWS
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA