| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88607894
Identifier: 88607894
GI number: 88607894
Start: 803751
End: 803900
Strand: Direct
Name: 88607894
Synonym: APH_0757
Alternate gene names: NA
Gene position: 803751-803900 (Clockwise)
Preceding gene: 88607485
Following gene: 88607346
Centisome position: 54.63
GC content: 39.33
Gene sequence:
>150_bases GTGAGCATTACAACAACAGGAAAGCTTTTAAGCTGCGCGTTTGCTGCTTTTTGTCATGATTATGCAGAAACGTTTATTAT TGCATGCGTAGAAAGTCTTTGGTTTTGTATGTTTTCTCTCGAGATCTTGGAGGCTACACTACTATCCTAG
Upstream 100 bases:
>100_bases AGAATAAGTAGTAGATCAGGGCATGGAAGTGGTGTCTCGCGATAAAATCTAAGGCTTTTTTTGTTGCAGTGTATTTTTAT CCTAGAAAAGTGTTGGGATA
Downstream 100 bases:
>100_bases CTATAAAGTTGCAAATCACTAAGTGGCATAGGAAAGAATCGGTGCGACTTTACTGTCTTTAAAGTTTATGTGCTGAAGCA GGGAATGGAGTGACGGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MSITTTGKLLSCAFAAFCHDYAETFIIACVESLWFCMFSLEILEATLLS
Sequences:
>Translated_49_residues MSITTTGKLLSCAFAAFCHDYAETFIIACVESLWFCMFSLEILEATLLS >Mature_48_residues SITTTGKLLSCAFAAFCHDYAETFIIACVESLWFCMFSLEILEATLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5443; Mature: 5312
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 8.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITTTGKLLSCAFAAFCHDYAETFIIACVESLWFCMFSLEILEATLLS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SITTTGKLLSCAFAAFCHDYAETFIIACVESLWFCMFSLEILEATLLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA