| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607888
Identifier: 88607888
GI number: 88607888
Start: 848424
End: 850964
Strand: Direct
Name: 88607888
Synonym: APH_0805
Alternate gene names: NA
Gene position: 848424-850964 (Clockwise)
Preceding gene: 88606920
Following gene: 88607071
Centisome position: 57.67
GC content: 40.14
Gene sequence:
>2541_bases ATGAGGAAGTGGGTTATAAACTTTTTGGGATTAAAAAACGCCCGAAGCCCAGAGAATGCACCGCGCCAAAGGCATTATTT GTACTTTCCTAATAAATTATCCCGTATTGGGGCATCTCAAGAATTAGGTGAAGGCAACGTATTGCGTTGGAAATTAATGC AAGAACGTATTAGGCCAAAGCAGCTAGATGAAAGGCATCCTGCTCAACATCTAGATGAAAGTAATTCCTTGAATTGGCAC TTAATCTATGAACCCAGTGGATCTCCCTCGCCTCCTGTGGCATTAGATCGCAATCTTATTACTGAAAAAATCTTAGACGT ACAGGGATTGTGCAACTATGTAAATAAGAATAGTAAGAGCATGCTCCCTGAAAACCTGCAAGATGCTCCAGAGGATACCT CTGAAAGCGTGCAAGCTGCGCTCTTACAAAATCTCTGGACAAAATGTCATGCTGAATTGGATGCAATACACGATCTCTTG GACAATAGCACTCAATCTCCCGAAACAGAAACAATTATCTTGCCAATTGTCAGGCATTGCCACGCAGCTATGCTACATCT GATTCACAGCACCTCTTCTGATATTATGACAGAGGATTACCATTTTACCGTATCGAAGGCGCTCTGTAATATATCAGATA TTGTATATGCAACTCAAAATACAGCCATATTACTGCCAGAGCCTCTGAAAGAACTACATGTATTCAACACATTATCAAAC TTGCAGGGTACATTGAGGTTGTTGACATACAGTATTGCGAAGTCAACTATCGTGCGGCACAATTGCCTAAAGGAATTCCT ATTAAGCTGCATAAACACAGCTACTTCTCTAAGCCGTCTCGTAAATACAAGAGACATTTCAGACGATGACAAGCTCATTG TTGCATATATTACAAAATTTGGCATAAAACTCGTAGCTTCGGCAATCGAGACTGGTGCTATTCCAAACTTTCAAGCATAT CAAGCCAATACTTCTATTAGACAAGCACTTGGACAGCCAAATTCCATAGTAGCAATAACAGCTGCTAAACTCTTTATACT CTCTGCAGACCGTTATGCTTCATTGGATGGTCCAGCGGTATGCGAAGTCAGCGATATTGAATTAGTACAAACATATCTGT TTGAATGTAAGTCTCTCATAGAAGAAATCTTCTATAAGTGTTCTAATTTCCACGACAGTGCCGATAATAGCGTGCGGAAA ATTATGATCACATTGAGTAACACTACACTGTCCCTAAATCGGGCAATAAATTCGTGCTATAACGATGTAGAAGGATTCTC TCAAACCCACATTGTAATTGCCCAATTAAAAACTGTATGTGAACATTTGGGATACTGCAATGGGGTTCTTGATCATGATA AACATGGAGAGATATTAATCCTACTGAATAAGGCCGCAATATCCGCACAACGATGCTTGGAAAAGTCGAAACACAGCACT CTGAGCAACTATGCTGCACACCCTATTCCAATATTCCCTGGGGGGACGCAACCTAAAGATAAGCAACAGAATAGCGTACC AGTAAAGGTTACCGCCTTACAGAAGATGTTTAGCAATTATGTTCAGAAGTCCAGCAGCTCAAAATCTGTGCGCTTTCATT TAAGAAAAAGCTCACTCAGAAAAAAGACATCAGCAGCGGAAAAAGACGTGTTTAAGCATCAACCTTTTACTAGTAAACAC GGTATTCTAGCTAAAACTAGTCAACTCCCCAAAAAAGTAAGCATAGAGAACACATACCGGCACATGCATGATCAAGAACA AAGTAATCCCTACGACACGCAAGTGCTGCAAATGTATGAGAAGGAAAATTCTAGTCTTGCTGTGCGCGGCAGAACACAGT TTCTGCAACCAAAATCCCGAGCACAGGGACAAGACTCTATTAGTGTTCACGTTGTGGAGATACACAAAAACATGCACGAT AGCCCACTTGAAGAAGAAGATATCTCAAGTTATCATAGTACTTTCCAGAAAAATCTTGTCGAACTGGATATTGCAATCGA ACTACTATGTAATATCTCTCGAAAGAGTAAAGAAGACACTATTCATGCAGCGCAACATGCTATACAAGATTGCACATCAA GTGGAATTCATACACCTTCATCCTCGGGAAAAACACAAGATTTTTATTGTAATGAACGCGCCAGAGCAATTGTAAAAGCT GCAAGAGACAGCATAGCAGGATTTACTATAGGATGCACCTCTTGTATAGGTCATGATCCTTGTGCAGTATTTGATAATTC TCTTGAACAAGAAGACGTCGAGTCCTTATCGTCGTCTTCAGAAGAAACGGTTATTTACGTCAAAAAACAAGATCTAGAAA CCCAAACTTCACAAGGAAGTATCGATATATCGGATAAAAGTAATAGTACTCCTGAAGAAAAAGCTGCAACTTCAGATAAA GCTATGATACAAGCAAGTGCTGCAATCTCACACGTACCTCAACGTGTTACAGTGCGGTTAACAGATACTTTTGTTATAGA GCATAACGTTACTCCTGAGGATGGCACAAATAAAGCTATCACTTCAAAGAGTATTGCCTGA
Upstream 100 bases:
>100_bases ACGAAATTTCACACTATTTAGCAGGTAACATTATTTTTTGTAGCAATATATTAAAAAATAAGCATAATTTGCGTTATTAC CTAATTTATTAGGAGATATC
Downstream 100 bases:
>100_bases CCTATCCGTATTAAGATGTACCGTGTATACTATATGAATCTTATGCCTGTAGCGATGTATGAATCTGCATTTTGCATTGC TATGCAGCACTTTCCCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 846
Protein sequence:
>846_residues MRKWVINFLGLKNARSPENAPRQRHYLYFPNKLSRIGASQELGEGNVLRWKLMQERIRPKQLDERHPAQHLDESNSLNWH LIYEPSGSPSPPVALDRNLITEKILDVQGLCNYVNKNSKSMLPENLQDAPEDTSESVQAALLQNLWTKCHAELDAIHDLL DNSTQSPETETIILPIVRHCHAAMLHLIHSTSSDIMTEDYHFTVSKALCNISDIVYATQNTAILLPEPLKELHVFNTLSN LQGTLRLLTYSIAKSTIVRHNCLKEFLLSCINTATSLSRLVNTRDISDDDKLIVAYITKFGIKLVASAIETGAIPNFQAY QANTSIRQALGQPNSIVAITAAKLFILSADRYASLDGPAVCEVSDIELVQTYLFECKSLIEEIFYKCSNFHDSADNSVRK IMITLSNTTLSLNRAINSCYNDVEGFSQTHIVIAQLKTVCEHLGYCNGVLDHDKHGEILILLNKAAISAQRCLEKSKHST LSNYAAHPIPIFPGGTQPKDKQQNSVPVKVTALQKMFSNYVQKSSSSKSVRFHLRKSSLRKKTSAAEKDVFKHQPFTSKH GILAKTSQLPKKVSIENTYRHMHDQEQSNPYDTQVLQMYEKENSSLAVRGRTQFLQPKSRAQGQDSISVHVVEIHKNMHD SPLEEEDISSYHSTFQKNLVELDIAIELLCNISRKSKEDTIHAAQHAIQDCTSSGIHTPSSSGKTQDFYCNERARAIVKA ARDSIAGFTIGCTSCIGHDPCAVFDNSLEQEDVESLSSSSEETVIYVKKQDLETQTSQGSIDISDKSNSTPEEKAATSDK AMIQASAAISHVPQRVTVRLTDTFVIEHNVTPEDGTNKAITSKSIA
Sequences:
>Translated_846_residues MRKWVINFLGLKNARSPENAPRQRHYLYFPNKLSRIGASQELGEGNVLRWKLMQERIRPKQLDERHPAQHLDESNSLNWH LIYEPSGSPSPPVALDRNLITEKILDVQGLCNYVNKNSKSMLPENLQDAPEDTSESVQAALLQNLWTKCHAELDAIHDLL DNSTQSPETETIILPIVRHCHAAMLHLIHSTSSDIMTEDYHFTVSKALCNISDIVYATQNTAILLPEPLKELHVFNTLSN LQGTLRLLTYSIAKSTIVRHNCLKEFLLSCINTATSLSRLVNTRDISDDDKLIVAYITKFGIKLVASAIETGAIPNFQAY QANTSIRQALGQPNSIVAITAAKLFILSADRYASLDGPAVCEVSDIELVQTYLFECKSLIEEIFYKCSNFHDSADNSVRK IMITLSNTTLSLNRAINSCYNDVEGFSQTHIVIAQLKTVCEHLGYCNGVLDHDKHGEILILLNKAAISAQRCLEKSKHST LSNYAAHPIPIFPGGTQPKDKQQNSVPVKVTALQKMFSNYVQKSSSSKSVRFHLRKSSLRKKTSAAEKDVFKHQPFTSKH GILAKTSQLPKKVSIENTYRHMHDQEQSNPYDTQVLQMYEKENSSLAVRGRTQFLQPKSRAQGQDSISVHVVEIHKNMHD SPLEEEDISSYHSTFQKNLVELDIAIELLCNISRKSKEDTIHAAQHAIQDCTSSGIHTPSSSGKTQDFYCNERARAIVKA ARDSIAGFTIGCTSCIGHDPCAVFDNSLEQEDVESLSSSSEETVIYVKKQDLETQTSQGSIDISDKSNSTPEEKAATSDK AMIQASAAISHVPQRVTVRLTDTFVIEHNVTPEDGTNKAITSKSIA >Mature_846_residues MRKWVINFLGLKNARSPENAPRQRHYLYFPNKLSRIGASQELGEGNVLRWKLMQERIRPKQLDERHPAQHLDESNSLNWH LIYEPSGSPSPPVALDRNLITEKILDVQGLCNYVNKNSKSMLPENLQDAPEDTSESVQAALLQNLWTKCHAELDAIHDLL DNSTQSPETETIILPIVRHCHAAMLHLIHSTSSDIMTEDYHFTVSKALCNISDIVYATQNTAILLPEPLKELHVFNTLSN LQGTLRLLTYSIAKSTIVRHNCLKEFLLSCINTATSLSRLVNTRDISDDDKLIVAYITKFGIKLVASAIETGAIPNFQAY QANTSIRQALGQPNSIVAITAAKLFILSADRYASLDGPAVCEVSDIELVQTYLFECKSLIEEIFYKCSNFHDSADNSVRK IMITLSNTTLSLNRAINSCYNDVEGFSQTHIVIAQLKTVCEHLGYCNGVLDHDKHGEILILLNKAAISAQRCLEKSKHST LSNYAAHPIPIFPGGTQPKDKQQNSVPVKVTALQKMFSNYVQKSSSSKSVRFHLRKSSLRKKTSAAEKDVFKHQPFTSKH GILAKTSQLPKKVSIENTYRHMHDQEQSNPYDTQVLQMYEKENSSLAVRGRTQFLQPKSRAQGQDSISVHVVEIHKNMHD SPLEEEDISSYHSTFQKNLVELDIAIELLCNISRKSKEDTIHAAQHAIQDCTSSGIHTPSSSGKTQDFYCNERARAIVKA ARDSIAGFTIGCTSCIGHDPCAVFDNSLEQEDVESLSSSSEETVIYVKKQDLETQTSQGSIDISDKSNSTPEEKAATSDK AMIQASAAISHVPQRVTVRLTDTFVIEHNVTPEDGTNKAITSKSIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94277; Mature: 94277
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKWVINFLGLKNARSPENAPRQRHYLYFPNKLSRIGASQELGEGNVLRWKLMQERIRPK CCCEEEEHHCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCEEEHHHHHHHCCCH QLDERHPAQHLDESNSLNWHLIYEPSGSPSPPVALDRNLITEKILDVQGLCNYVNKNSKS HHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH MLPENLQDAPEDTSESVQAALLQNLWTKCHAELDAIHDLLDNSTQSPETETIILPIVRHC CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH HAAMLHLIHSTSSDIMTEDYHFTVSKALCNISDIVYATQNTAILLPEPLKELHVFNTLSN HHHHHHHHHCCCCCCCCCCCEEEHHHHHHCHHHHEEECCCCEEECCCHHHHHHHHHHHHH LQGTLRLLTYSIAKSTIVRHNCLKEFLLSCINTATSLSRLVNTRDISDDDKLIVAYITKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GIKLVASAIETGAIPNFQAYQANTSIRQALGQPNSIVAITAAKLFILSADRYASLDGPAV HHHHHHHHHHHCCCCCCHHEECCHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCE CEVSDIELVQTYLFECKSLIEEIFYKCSNFHDSADNSVRKIMITLSNTTLSLNRAINSCY EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEHHHHHHHHHH NDVEGFSQTHIVIAQLKTVCEHLGYCNGVLDHDKHGEILILLNKAAISAQRCLEKSKHST HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHH LSNYAAHPIPIFPGGTQPKDKQQNSVPVKVTALQKMFSNYVQKSSSSKSVRFHLRKSSLR HHHCCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH KKTSAAEKDVFKHQPFTSKHGILAKTSQLPKKVSIENTYRHMHDQEQSNPYDTQVLQMYE HHHHHHHHHHHHCCCCCCCCCCEEEHHCCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHH KENSSLAVRGRTQFLQPKSRAQGQDSISVHVVEIHKNMHDSPLEEEDISSYHSTFQKNLV HCCCCEEEECCHHHCCCHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH ELDIAIELLCNISRKSKEDTIHAAQHAIQDCTSSGIHTPSSSGKTQDFYCNERARAIVKA HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHHHHH ARDSIAGFTIGCTSCIGHDPCAVFDNSLEQEDVESLSSSSEETVIYVKKQDLETQTSQGS HHHHHCCEEEEHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC IDISDKSNSTPEEKAATSDKAMIQASAAISHVPQRVTVRLTDTFVIEHNVTPEDGTNKAI EEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCCCCCC TSKSIA CCCCCC >Mature Secondary Structure MRKWVINFLGLKNARSPENAPRQRHYLYFPNKLSRIGASQELGEGNVLRWKLMQERIRPK CCCEEEEHHCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCEEEHHHHHHHCCCH QLDERHPAQHLDESNSLNWHLIYEPSGSPSPPVALDRNLITEKILDVQGLCNYVNKNSKS HHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH MLPENLQDAPEDTSESVQAALLQNLWTKCHAELDAIHDLLDNSTQSPETETIILPIVRHC CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH HAAMLHLIHSTSSDIMTEDYHFTVSKALCNISDIVYATQNTAILLPEPLKELHVFNTLSN HHHHHHHHHCCCCCCCCCCCEEEHHHHHHCHHHHEEECCCCEEECCCHHHHHHHHHHHHH LQGTLRLLTYSIAKSTIVRHNCLKEFLLSCINTATSLSRLVNTRDISDDDKLIVAYITKF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GIKLVASAIETGAIPNFQAYQANTSIRQALGQPNSIVAITAAKLFILSADRYASLDGPAV HHHHHHHHHHHCCCCCCHHEECCHHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCCCCE CEVSDIELVQTYLFECKSLIEEIFYKCSNFHDSADNSVRKIMITLSNTTLSLNRAINSCY EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEHHHHHHHHHH NDVEGFSQTHIVIAQLKTVCEHLGYCNGVLDHDKHGEILILLNKAAISAQRCLEKSKHST HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHH LSNYAAHPIPIFPGGTQPKDKQQNSVPVKVTALQKMFSNYVQKSSSSKSVRFHLRKSSLR HHHCCCCCCEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH KKTSAAEKDVFKHQPFTSKHGILAKTSQLPKKVSIENTYRHMHDQEQSNPYDTQVLQMYE HHHHHHHHHHHHCCCCCCCCCCEEEHHCCCCCCCHHHHHHHHCCHHCCCCHHHHHHHHHH KENSSLAVRGRTQFLQPKSRAQGQDSISVHVVEIHKNMHDSPLEEEDISSYHSTFQKNLV HCCCCEEEECCHHHCCCHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH ELDIAIELLCNISRKSKEDTIHAAQHAIQDCTSSGIHTPSSSGKTQDFYCNERARAIVKA HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCHHHHHHHHH ARDSIAGFTIGCTSCIGHDPCAVFDNSLEQEDVESLSSSSEETVIYVKKQDLETQTSQGS HHHHHCCEEEEHHHHCCCCCHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC IDISDKSNSTPEEKAATSDKAMIQASAAISHVPQRVTVRLTDTFVIEHNVTPEDGTNKAI EEECCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCCCCCC TSKSIA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA