Click here to switch to the map view.

The map label for this gene is 88607861

Identifier: 88607861

GI number: 88607861

Start: 1012194

End: 1013345

Strand: Direct

Name: 88607861

Synonym: APH_0949

Alternate gene names: NA

Gene position: 1012194-1013345 (Clockwise)

Preceding gene: 88606890

Following gene: 88606842

Centisome position: 68.8

GC content: 43.32

Gene sequence:

>1152_bases
ATGGTAAAAAAAGTATTAGAAGAGGGCGGGGGTATTTATACCGAAAATAGCGTTTTGGTAGAGTCGTCAGATGACGAAGA
GACACACCCCCTGATCGTTGGAGAGGAACAACTTAGGAAAGATAAAGAAAAAGAGTCTGAAAGTACCAGCGAAAGCAACG
TATCAGAGACAGTTTTCCTAGTGGCGTCGTTTCTAATGATGCTTGCAGAGACTTTCTCTACGTTTTTTACATTAGCAGTT
ATCCACTATTCTATAAAGCCCTCTATAGTACACCGCGTAACTCTTGCTTATTTTACGGTATACGCGCTACTCGCTGTGGT
GCTTCTTTTAGATTCCTACGCGGCTGTATTGAAGCATCGTAAAGACCTTGAGGAAGGCAAGATAACAGGGGAGGAGTATA
AAATAAGGCACTCGAAGGACAGCACTACAATCGCATCAAGTGTGTACTGGGTAATGCTGTGTGTATTATCTCTCATCATG
GAAGTTGGTATTGAAAGCAAGGCCATACAGATGATTGCTCTTGTAGTCTCTATACTAGCTCCCTTGCTCGGTGCAATATC
GGCATTCATCCGAGCATATGAGGTAATGTATGAGCATAAACAAAAGATCAACTCCGAAGGTGGGGATAAAGCAGCATCGA
AAACCGGTGTGTGGGTGAAGTCGTTTGTCTTCTTGACGATAGCGTTGTTTGAGGCTTTCCATTGTATATGTCACTTCTAT
GAAGCATATCTTCTAGTGGGAGAAACGCACAAGCTGTTCTACATAACAGATATGGCTTTACTGACAACACAAGCAGCTCT
AGCGGTAGCGTTCGTTATCTTCTACTTTTACGAAAAGATCGTGGGTGAGGAAAAAGATCAGCCATTTGTGGACCACCAAG
GAGATACAAAACCTACCGATAAGGGAGGAGAAGGTGTACGCGGTTATGTAAACGATAATATCGGGGCTGAAGACACTAGT
AACACAGAGAAAGGTTGTTGTGGTGATCAAGGTAAACGTACCACAAAGTCGATGCTCGACGCGATACCTGGGGGAACTGA
CATGGGTAGTGAGAAACCTAGCACAGGGTTGGATTGCACTCCGGAGTATAAAGAACTTTTTGTTCGGCAGATATTTGACA
GTAGTAAAGATAAGCAACAAAGAACAGCTTAG

Upstream 100 bases:

>100_bases
TAAATTTTTCGCATATATAAGATATTACTATTTTTAGTTGACTTGGCACAAAGTGATTAATACTATTTTGAGGGTTCTTT
TGTAATCAAAGCGGGTGGAT

Downstream 100 bases:

>100_bases
TGGACCTTTGTTGCTACTTTGCGTGTAGTGCAATGTAGAGAATAAAGAGAGAAGAGGCTATTCTCACCGCGCTTCTTCTC
TCTTGCCAGTGTAGTGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MVKKVLEEGGGIYTENSVLVESSDDEETHPLIVGEEQLRKDKEKESESTSESNVSETVFLVASFLMMLAETFSTFFTLAV
IHYSIKPSIVHRVTLAYFTVYALLAVVLLLDSYAAVLKHRKDLEEGKITGEEYKIRHSKDSTTIASSVYWVMLCVLSLIM
EVGIESKAIQMIALVVSILAPLLGAISAFIRAYEVMYEHKQKINSEGGDKAASKTGVWVKSFVFLTIALFEAFHCICHFY
EAYLLVGETHKLFYITDMALLTTQAALAVAFVIFYFYEKIVGEEKDQPFVDHQGDTKPTDKGGEGVRGYVNDNIGAEDTS
NTEKGCCGDQGKRTTKSMLDAIPGGTDMGSEKPSTGLDCTPEYKELFVRQIFDSSKDKQQRTA

Sequences:

>Translated_383_residues
MVKKVLEEGGGIYTENSVLVESSDDEETHPLIVGEEQLRKDKEKESESTSESNVSETVFLVASFLMMLAETFSTFFTLAV
IHYSIKPSIVHRVTLAYFTVYALLAVVLLLDSYAAVLKHRKDLEEGKITGEEYKIRHSKDSTTIASSVYWVMLCVLSLIM
EVGIESKAIQMIALVVSILAPLLGAISAFIRAYEVMYEHKQKINSEGGDKAASKTGVWVKSFVFLTIALFEAFHCICHFY
EAYLLVGETHKLFYITDMALLTTQAALAVAFVIFYFYEKIVGEEKDQPFVDHQGDTKPTDKGGEGVRGYVNDNIGAEDTS
NTEKGCCGDQGKRTTKSMLDAIPGGTDMGSEKPSTGLDCTPEYKELFVRQIFDSSKDKQQRTA
>Mature_383_residues
MVKKVLEEGGGIYTENSVLVESSDDEETHPLIVGEEQLRKDKEKESESTSESNVSETVFLVASFLMMLAETFSTFFTLAV
IHYSIKPSIVHRVTLAYFTVYALLAVVLLLDSYAAVLKHRKDLEEGKITGEEYKIRHSKDSTTIASSVYWVMLCVLSLIM
EVGIESKAIQMIALVVSILAPLLGAISAFIRAYEVMYEHKQKINSEGGDKAASKTGVWVKSFVFLTIALFEAFHCICHFY
EAYLLVGETHKLFYITDMALLTTQAALAVAFVIFYFYEKIVGEEKDQPFVDHQGDTKPTDKGGEGVRGYVNDNIGAEDTS
NTEKGCCGDQGKRTTKSMLDAIPGGTDMGSEKPSTGLDCTPEYKELFVRQIFDSSKDKQQRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42538; Mature: 42538

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKVLEEGGGIYTENSVLVESSDDEETHPLIVGEEQLRKDKEKESESTSESNVSETVFL
CCHHHHHCCCCEEECCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHH
VASFLMMLAETFSTFFTLAVIHYSIKPSIVHRVTLAYFTVYALLAVVLLLDSYAAVLKHR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLEEGKITGEEYKIRHSKDSTTIASSVYWVMLCVLSLIMEVGIESKAIQMIALVVSILA
HHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
PLLGAISAFIRAYEVMYEHKQKINSEGGDKAASKTGVWVKSFVFLTIALFEAFHCICHFY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYLLVGETHKLFYITDMALLTTQAALAVAFVIFYFYEKIVGEEKDQPFVDHQGDTKPTD
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
KGGEGVRGYVNDNIGAEDTSNTEKGCCGDQGKRTTKSMLDAIPGGTDMGSEKPSTGLDCT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PEYKELFVRQIFDSSKDKQQRTA
HHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MVKKVLEEGGGIYTENSVLVESSDDEETHPLIVGEEQLRKDKEKESESTSESNVSETVFL
CCHHHHHCCCCEEECCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCCHHHHHHHHHH
VASFLMMLAETFSTFFTLAVIHYSIKPSIVHRVTLAYFTVYALLAVVLLLDSYAAVLKHR
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLEEGKITGEEYKIRHSKDSTTIASSVYWVMLCVLSLIMEVGIESKAIQMIALVVSILA
HHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
PLLGAISAFIRAYEVMYEHKQKINSEGGDKAASKTGVWVKSFVFLTIALFEAFHCICHFY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYLLVGETHKLFYITDMALLTTQAALAVAFVIFYFYEKIVGEEKDQPFVDHQGDTKPTD
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
KGGEGVRGYVNDNIGAEDTSNTEKGCCGDQGKRTTKSMLDAIPGGTDMGSEKPSTGLDCT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PEYKELFVRQIFDSSKDKQQRTA
HHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA