Click here to switch to the map view.

The map label for this gene is 88607768

Identifier: 88607768

GI number: 88607768

Start: 1445949

End: 1446449

Strand: Reverse

Name: 88607768

Synonym: APH_1383

Alternate gene names: NA

Gene position: 1446449-1445949 (Counterclockwise)

Preceding gene: 88606814

Following gene: 88607174

Centisome position: 98.31

GC content: 38.52

Gene sequence:

>501_bases
ATGTTCGATTCATTTAATGACTTTGCAACAGCATCTGTAACTATATCTTGTAATAAGGAACATTCGTCTTTTCCAAGTTC
CTACTGCGACTTTTCTGTAGAAAATTTACCGTTTATTAGAGCTACTCCAGTTGAAGCACACAACCTCACTGGTAATGAAT
CTTATGCTTTAACATTTGCTAACTCTGATCCGGAAGCGCCAAAGGTTGATGATTACTTTTTAGAGACCATTCTTGTTGAG
CGCAAGGTAGGTAGGTCAGATGTAAATTTCTATAGCGCAACCTTGCACGAAGTAACAGTAAGAGATTCTGAAGCACACCA
AAGCGAAGATAATGGCAAGAATGACAATGATGTTCATGCACGAGCAAGACAAATGTTTATAGCTGAACTAAAAGCTAATA
CGACATCAGAAAATGACGATACGCTAGTGCTTACTTCTGCGGAAAACTCCTCAAAATGTTCAGTAACCATAACACTGAAA
AAAGCTTCTACATCCGCCTAG

Upstream 100 bases:

>100_bases
TGCTAGCGCGATGTGCAAATATTAGTATATTTACTTTGCAAAACTTGAGTGATTCTTATACAGTCTGGCACTTAAAATTA
TGCTCCGGAGAATCACATAT

Downstream 100 bases:

>100_bases
ATTTAGCAAAGTACCTACAACACAATTTCCGCGCTAGTAGGCAATGTTCTGCTAGCGCGATATTCAAATATTAGTATAAA
TTTACTTTGCAAAACCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MFDSFNDFATASVTISCNKEHSSFPSSYCDFSVENLPFIRATPVEAHNLTGNESYALTFANSDPEAPKVDDYFLETILVE
RKVGRSDVNFYSATLHEVTVRDSEAHQSEDNGKNDNDVHARARQMFIAELKANTTSENDDTLVLTSAENSSKCSVTITLK
KASTSA

Sequences:

>Translated_166_residues
MFDSFNDFATASVTISCNKEHSSFPSSYCDFSVENLPFIRATPVEAHNLTGNESYALTFANSDPEAPKVDDYFLETILVE
RKVGRSDVNFYSATLHEVTVRDSEAHQSEDNGKNDNDVHARARQMFIAELKANTTSENDDTLVLTSAENSSKCSVTITLK
KASTSA
>Mature_166_residues
MFDSFNDFATASVTISCNKEHSSFPSSYCDFSVENLPFIRATPVEAHNLTGNESYALTFANSDPEAPKVDDYFLETILVE
RKVGRSDVNFYSATLHEVTVRDSEAHQSEDNGKNDNDVHARARQMFIAELKANTTSENDDTLVLTSAENSSKCSVTITLK
KASTSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18303; Mature: 18303

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSFNDFATASVTISCNKEHSSFPSSYCDFSVENLPFIRATPVEAHNLTGNESYALTFA
CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEC
NSDPEAPKVDDYFLETILVERKVGRSDVNFYSATLHEVTVRDSEAHQSEDNGKNDNDVHA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCHHCCCCCCCCCCHHHH
RARQMFIAELKANTTSENDDTLVLTSAENSSKCSVTITLKKASTSA
HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MFDSFNDFATASVTISCNKEHSSFPSSYCDFSVENLPFIRATPVEAHNLTGNESYALTFA
CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEC
NSDPEAPKVDDYFLETILVERKVGRSDVNFYSATLHEVTVRDSEAHQSEDNGKNDNDVHA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCHHCCCCCCCCCCHHHH
RARQMFIAELKANTTSENDDTLVLTSAENSSKCSVTITLKKASTSA
HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA