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The map label for this gene is 88607697

Identifier: 88607697

GI number: 88607697

Start: 1222839

End: 1224230

Strand: Reverse

Name: 88607697

Synonym: APH_1158

Alternate gene names: NA

Gene position: 1224230-1222839 (Counterclockwise)

Preceding gene: 88607658

Following gene: 88606990

Centisome position: 83.21

GC content: 41.81

Gene sequence:

>1392_bases
ATGAGGAATAAGCTATTTGGTCATGTGCTATTTTTTATTAGCGTTTTGTTTTGGGGTACTCATTGCTTTGCCTCCGATAT
GAAAATTGACATTCGCGACGTGAAGACTTCTGCAGGGATTGGTTACTGGTACAAGCAAAAAGAAGGGCTTCCTCTGGTGT
CTATGACTATGGCATTTAAAAATGCTGGTTTCATTTATGATCCTATAGACAAAAAGGGTTTGGCGTTGTTAGCAACCTCG
TTGATATCGCGTGGTACGACGAAGGATGGGGAAAGTATTGCTAAGCTGTTTCAAGAGAAAGGAATAATTTTTCATGTTTC
TGTAGACAGCGACAATGCTTATGTAACGTTGAAGACTCTTTCCGAGAATTTAGATTTTGCACTAGGATTGATAGGGGAGG
TGTTGGTAGATTCTCCTATTGATGAAGAGGTTTTCGTCATAGAAAAGGAGCGTCAAAAATCAGACATAAGACGTGATTCT
AGTGATCCGGGACAGCTAGCGCATAACATGTTGAACAAAGTTGTATTTGGTGATCAGCCGCACGCTTATGACGCTTCCGG
CACATTAGACGCTCTTGAAGGGGTTACCATTGAAGACGTGGAAAATTACCGACGTGAAAATTTTGACTTAGACAAACTGG
TAATAGGTGTTGTTGGAAATGCATCTGAAGAGGATGTTTCACGCATGCTGGATAGAGCTCTTGCCCGTCTTGGTAGAGGG
CAAAATTCCAAGGTAATTGGCGATGCAGTTCTTAACATAGGGTTGCGTGGATATGTTGCGTATGATTCGCCGCAGAGTGT
TATAGTTTTTGCAGCGAAGAGCATACCTCGTAAAGATCCAAAGTATCATGTGGCGGAGGTTCTTAGCAGTGCACTAGGTG
GTATGGGTCTAAGTTCGGTTCTTATGCAGGAGCTACGTGAAAAGTTGGGCATAACGTACAATGTACGCAGTGGTCTGTAT
AATGTAGAAGGTGCAAGTCTGTTCCAAGGTATTTTGTTTACCGATAAAACAACTGCAAGAAAAGGTGTAGAAGCGTTTTT
AAGGACTGTGCAATCTGTTAAGGAAAAGGGGCTAGACAAACGTGCGCTTGAGATTGCGCGTGCAAAAATAGTGAGTTCTA
CTCTCTTTTCACTCTCCAGAACTTCTTCTATGTCTCAGGTATTGGTATATCTACAGCTGCATGGTTTTGGTGCAGACATT
CACAATTACAGTGCTAGGTATGAATCTGTCACTCTGGAAGAAGTTAACGAGTTTGCTAAAAATTTCTTAGGAGACTTTAC
CATTGTAGAGGTTGGCGCAGAAAATAATATTGATGCGACTATTACTTCGTGTGAAAATCTAATTCCAAATGATTGTGCAG
CTATGAAACCCGCAGAAAGCCGGGTTTCGTAG

Upstream 100 bases:

>100_bases
CCTGAAGAAGGCTTTGATATAGCAACGGAATTTCCGCGCGAGGATGAGGCTATGTGGTCTCCAGATGATGAAAGTATAGT
GTCTGTAACGGAGGCATAAA

Downstream 100 bases:

>100_bases
CTGGCCAACCTAGTGTGTGCTTGTGTGTGTGTTACAAAGGTTTTACAATTGACTAGTGTTACTTGGGGTTGTGCGTGTTC
GGTGCAATTTCACGGCGAAG

Product: M16 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MRNKLFGHVLFFISVLFWGTHCFASDMKIDIRDVKTSAGIGYWYKQKEGLPLVSMTMAFKNAGFIYDPIDKKGLALLATS
LISRGTTKDGESIAKLFQEKGIIFHVSVDSDNAYVTLKTLSENLDFALGLIGEVLVDSPIDEEVFVIEKERQKSDIRRDS
SDPGQLAHNMLNKVVFGDQPHAYDASGTLDALEGVTIEDVENYRRENFDLDKLVIGVVGNASEEDVSRMLDRALARLGRG
QNSKVIGDAVLNIGLRGYVAYDSPQSVIVFAAKSIPRKDPKYHVAEVLSSALGGMGLSSVLMQELREKLGITYNVRSGLY
NVEGASLFQGILFTDKTTARKGVEAFLRTVQSVKEKGLDKRALEIARAKIVSSTLFSLSRTSSMSQVLVYLQLHGFGADI
HNYSARYESVTLEEVNEFAKNFLGDFTIVEVGAENNIDATITSCENLIPNDCAAMKPAESRVS

Sequences:

>Translated_463_residues
MRNKLFGHVLFFISVLFWGTHCFASDMKIDIRDVKTSAGIGYWYKQKEGLPLVSMTMAFKNAGFIYDPIDKKGLALLATS
LISRGTTKDGESIAKLFQEKGIIFHVSVDSDNAYVTLKTLSENLDFALGLIGEVLVDSPIDEEVFVIEKERQKSDIRRDS
SDPGQLAHNMLNKVVFGDQPHAYDASGTLDALEGVTIEDVENYRRENFDLDKLVIGVVGNASEEDVSRMLDRALARLGRG
QNSKVIGDAVLNIGLRGYVAYDSPQSVIVFAAKSIPRKDPKYHVAEVLSSALGGMGLSSVLMQELREKLGITYNVRSGLY
NVEGASLFQGILFTDKTTARKGVEAFLRTVQSVKEKGLDKRALEIARAKIVSSTLFSLSRTSSMSQVLVYLQLHGFGADI
HNYSARYESVTLEEVNEFAKNFLGDFTIVEVGAENNIDATITSCENLIPNDCAAMKPAESRVS
>Mature_463_residues
MRNKLFGHVLFFISVLFWGTHCFASDMKIDIRDVKTSAGIGYWYKQKEGLPLVSMTMAFKNAGFIYDPIDKKGLALLATS
LISRGTTKDGESIAKLFQEKGIIFHVSVDSDNAYVTLKTLSENLDFALGLIGEVLVDSPIDEEVFVIEKERQKSDIRRDS
SDPGQLAHNMLNKVVFGDQPHAYDASGTLDALEGVTIEDVENYRRENFDLDKLVIGVVGNASEEDVSRMLDRALARLGRG
QNSKVIGDAVLNIGLRGYVAYDSPQSVIVFAAKSIPRKDPKYHVAEVLSSALGGMGLSSVLMQELREKLGITYNVRSGLY
NVEGASLFQGILFTDKTTARKGVEAFLRTVQSVKEKGLDKRALEIARAKIVSSTLFSLSRTSSMSQVLVYLQLHGFGADI
HNYSARYESVTLEEVNEFAKNFLGDFTIVEVGAENNIDATITSCENLIPNDCAAMKPAESRVS

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 50958; Mature: 50958

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKLFGHVLFFISVLFWGTHCFASDMKIDIRDVKTSAGIGYWYKQKEGLPLVSMTMAFK
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEECCCCCCCHHHHHHHH
NAGFIYDPIDKKGLALLATSLISRGTTKDGESIAKLFQEKGIIFHVSVDSDNAYVTLKTL
CCCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEH
SENLDFALGLIGEVLVDSPIDEEVFVIEKERQKSDIRRDSSDPGQLAHNMLNKVVFGDQP
HCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
HAYDASGTLDALEGVTIEDVENYRRENFDLDKLVIGVVGNASEEDVSRMLDRALARLGRG
CCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC
QNSKVIGDAVLNIGLRGYVAYDSPQSVIVFAAKSIPRKDPKYHVAEVLSSALGGMGLSSV
CCCCCHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHH
LMQELREKLGITYNVRSGLYNVEGASLFQGILFTDKTTARKGVEAFLRTVQSVKEKGLDK
HHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH
RALEIARAKIVSSTLFSLSRTSSMSQVLVYLQLHGFGADIHNYSARYESVTLEEVNEFAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHEEEHHHHHHHHH
NFLGDFTIVEVGAENNIDATITSCENLIPNDCAAMKPAESRVS
HHCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHCCCCCHHCCC
>Mature Secondary Structure
MRNKLFGHVLFFISVLFWGTHCFASDMKIDIRDVKTSAGIGYWYKQKEGLPLVSMTMAFK
CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEECCCCCCCHHHHHHHH
NAGFIYDPIDKKGLALLATSLISRGTTKDGESIAKLFQEKGIIFHVSVDSDNAYVTLKTL
CCCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEEEH
SENLDFALGLIGEVLVDSPIDEEVFVIEKERQKSDIRRDSSDPGQLAHNMLNKVVFGDQP
HCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
HAYDASGTLDALEGVTIEDVENYRRENFDLDKLVIGVVGNASEEDVSRMLDRALARLGRG
CCCCCCCCHHHHCCCCHHHHHHHHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC
QNSKVIGDAVLNIGLRGYVAYDSPQSVIVFAAKSIPRKDPKYHVAEVLSSALGGMGLSSV
CCCCCHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHH
LMQELREKLGITYNVRSGLYNVEGASLFQGILFTDKTTARKGVEAFLRTVQSVKEKGLDK
HHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHH
RALEIARAKIVSSTLFSLSRTSSMSQVLVYLQLHGFGADIHNYSARYESVTLEEVNEFAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHEEEHHHHHHHHH
NFLGDFTIVEVGAENNIDATITSCENLIPNDCAAMKPAESRVS
HHCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]