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The map label for this gene is ybhL [C]

Identifier: 88607665

GI number: 88607665

Start: 1409278

End: 1409979

Strand: Reverse

Name: ybhL [C]

Synonym: APH_1345

Alternate gene names: 88607665

Gene position: 1409979-1409278 (Counterclockwise)

Preceding gene: 88606995

Following gene: 88607207

Centisome position: 95.83

GC content: 41.74

Gene sequence:

>702_bases
ATGGATAGTTATAACGTTAGGTATGAGAGTGCCTATTATTGCGCGGGGCTGAGAAGCTACCTGGTGCGCGTTTATAACTA
TATGGCATTGGCTTTGGGGATTACTGGGGCTGTTGCATTTATAGCGTCGCTTTCCGGGGGATTAATGGCTGCGATATATG
GAACTCCTTTGCATTGGGTGGTTTCATTAGCTCCTGTTATTACTGTTTTTGTTATGTCTGCTAGGGTTCATCAGATGAGC
TATCAGACGATGATGATGGTGTTTCTGGGGTTCTCAGCGATGATGGGTTTATCGCTGTCGTACGTTTTCATGGTGTATAC
GTCTCATAGTATTGCCAGGGTTTTCTTCATTTCCTCTGCTATGTTTGGGACTATGGCCTGGTATGGTAATACTACTAAGA
GAGATTTATCTAAGTTTAGCACATTTTTGACTATGGGTGTTGTGGGCTTGATAATAGCTTCAGTAGTTAACTTGTTTATG
CGGAGTGGACCTCTTTATTTCGCTATTTCTGTTGTTGCTGTTCTTGTATTTACAGCTCTCACTGCAGTAAATGCACAGGA
GATAAAGGATATGTATTACCGCTTTAATGATGGTGATAGTAACACTGTAGGGAAGATGTCTATTCTAGGTGCTACTAGCT
TGTACTTCTCTTATATCAATATATTCGTCCATATGCTGCATCTTATGGGTGACCGCAGGTAG

Upstream 100 bases:

>100_bases
GCTTTGAATGGGGGTGGGGGTGGATTGTTCCTATTTTCATTGCGTGCAAGGTGTGAGTATGTTAGAATCCCGGGTTATTG
TCACTTAGGTAGGGGACTTT

Downstream 100 bases:

>100_bases
GGGTTTTCGATAGTAGGCGATGTTATCTTGCCGATACGAAGGTCTAAACCTGTTATCTCTTAGAAGGGTAGCCAGGGAAT
TGGCAGGAAGTCTTCGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDSYNVRYESAYYCAGLRSYLVRVYNYMALALGITGAVAFIASLSGGLMAAIYGTPLHWVVSLAPVITVFVMSARVHQMS
YQTMMMVFLGFSAMMGLSLSYVFMVYTSHSIARVFFISSAMFGTMAWYGNTTKRDLSKFSTFLTMGVVGLIIASVVNLFM
RSGPLYFAISVVAVLVFTALTAVNAQEIKDMYYRFNDGDSNTVGKMSILGATSLYFSYINIFVHMLHLMGDRR

Sequences:

>Translated_233_residues
MDSYNVRYESAYYCAGLRSYLVRVYNYMALALGITGAVAFIASLSGGLMAAIYGTPLHWVVSLAPVITVFVMSARVHQMS
YQTMMMVFLGFSAMMGLSLSYVFMVYTSHSIARVFFISSAMFGTMAWYGNTTKRDLSKFSTFLTMGVVGLIIASVVNLFM
RSGPLYFAISVVAVLVFTALTAVNAQEIKDMYYRFNDGDSNTVGKMSILGATSLYFSYINIFVHMLHLMGDRR
>Mature_233_residues
MDSYNVRYESAYYCAGLRSYLVRVYNYMALALGITGAVAFIASLSGGLMAAIYGTPLHWVVSLAPVITVFVMSARVHQMS
YQTMMMVFLGFSAMMGLSLSYVFMVYTSHSIARVFFISSAMFGTMAWYGNTTKRDLSKFSTFLTMGVVGLIIASVVNLFM
RSGPLYFAISVVAVLVFTALTAVNAQEIKDMYYRFNDGDSNTVGKMSILGATSLYFSYINIFVHMLHLMGDRR

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=220, Percent_Identity=38.6363636363636, Blast_Score=162, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25891; Mature: 25891

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSYNVRYESAYYCAGLRSYLVRVYNYMALALGITGAVAFIASLSGGLMAAIYGTPLHWV
CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHH
VSLAPVITVFVMSARVHQMSYQTMMMVFLGFSAMMGLSLSYVFMVYTSHSIARVFFISSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFGTMAWYGNTTKRDLSKFSTFLTMGVVGLIIASVVNLFMRSGPLYFAISVVAVLVFTAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TAVNAQEIKDMYYRFNDGDSNTVGKMSILGATSLYFSYINIFVHMLHLMGDRR
HHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSYNVRYESAYYCAGLRSYLVRVYNYMALALGITGAVAFIASLSGGLMAAIYGTPLHWV
CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCHHHHH
VSLAPVITVFVMSARVHQMSYQTMMMVFLGFSAMMGLSLSYVFMVYTSHSIARVFFISSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFGTMAWYGNTTKRDLSKFSTFLTMGVVGLIIASVVNLFMRSGPLYFAISVVAVLVFTAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TAVNAQEIKDMYYRFNDGDSNTVGKMSILGATSLYFSYINIFVHMLHLMGDRR
HHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]