| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607579
Identifier: 88607579
GI number: 88607579
Start: 878687
End: 880057
Strand: Direct
Name: 88607579
Synonym: APH_0829
Alternate gene names: NA
Gene position: 878687-880057 (Clockwise)
Preceding gene: 88607090
Following gene: 88607342
Centisome position: 59.72
GC content: 38.22
Gene sequence:
>1371_bases ATGCTTGTACCAGAATATTCTCATATCGAAGATCCTTTAAGAAATGCCAGCATAGGCTCCGTGAGCTTTTTGGAAGCTGT ACTTAGTGAAATCATAGAAAATGGCATATCGTCTAAAAAAGTTTCTGATGCTTTCGTGTTTTCACTCATCTATGCCAGAA ATGCTGTTTCTATCACACCTCACTGTAGGCCATTAGGCTCGCAAAGTGTAGCGCATGCTGCTTATATCCTGAATTGCATC ATGGAGAATAATATGAAGGCTGATCAAACCTTCTCGCAATGGTTCTCGTATACCAATGATAACCTTACTAGAGTATTAGA GCATCTGTCTACGAGTTTGGAGCATCCTAATATAAAGCAGCATGTGGTTTGTACGGAGGAGCGGTATGAAGCTGTGAAGA CGTGTATTTTTCCTGTCATTACAGCAATGATGATCACCTATCACAGCAGCATGCCTCAAATCCCGAAGCAATCTTTCAAA GAATTATTGGAAAAGGATAATATTATCAATAAGAAATACAGTACTCTAAAGAGAATTATATTCAACACCATAAGTGCTCT AATCCAAGAAGCTCCTAATTACAAGAGCAAAACTAGGGAAGATTACAACAGCGGGATATCATGCATCACAGAAATTATTG ATAGGATGTCATTACTGTTGAATAGCAGAACACCGCTTTCTGATCGCAGTAGGATCAGCATGTGCTTACACAGTGCTGTT TCTACGCTGATTGCCTCTGTGACGTACAATGCTTCGCACCATGTAGAATACTACCAGACCTTTCAGATTCTTGATATTGC ATTAATTGCTCTTCGCGAGGAACTCTATAATTTTTCCAATGTATGTAATCTAAAACTTGATGATAAAGGCGCAATTCATC CGTATTCGCACATCTTAACGAAGTTATTGTCATCAACTCTAGAACTATCAACTCTTGCATCTAATATCTCGATTAGAAAC GATATTGCCTATTGTCAAAAAACAATGCTCGATCTTTACGTGCATTACCTGAATAGGCCAAAAATTGCATCTATCTTATC TAAAAACTCTGTTGCACGTATAGAATTTGGTGAACCTCCCGTATACGGTGAGTTCGTGAGCCAAATTAATAGTACAATAG CAATACTACAGCGCACAAAAGTACTCAAAGTTAATGCAGAAAGCTCGTCACGAATACTACAATATGCTTGTAAAGATTTT ACTCAGATACAACGAAAATTGACAAAAAGCACGAATGACCCACAAGTGTTATTAGGTACAGAAAATGATGTCTTAATCTC TACCGAAGAACCCATGTTTGAGCTTCCACAAAGTACACATATTACCTCACTAACGAGCATGGCACACGGTACTGGATATC ATATAAACTGA
Upstream 100 bases:
>100_bases TAATGTCGCTAATTTTTTGATTGTTTTAAAAAATAATATCTTTTATCCCTCAATAACTAAGATAGTATTACATAATTAGT TGGATATAACGTAAAATAAT
Downstream 100 bases:
>100_bases TGCAATAGGTAGTTTAATTAGCTCTTTTCTGGCCAAAGCGGCGCGGGAGCAATTACTAAGGCCAAGTGTAGCATTGCAAT AAATAATATTACACAGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MLVPEYSHIEDPLRNASIGSVSFLEAVLSEIIENGISSKKVSDAFVFSLIYARNAVSITPHCRPLGSQSVAHAAYILNCI MENNMKADQTFSQWFSYTNDNLTRVLEHLSTSLEHPNIKQHVVCTEERYEAVKTCIFPVITAMMITYHSSMPQIPKQSFK ELLEKDNIINKKYSTLKRIIFNTISALIQEAPNYKSKTREDYNSGISCITEIIDRMSLLLNSRTPLSDRSRISMCLHSAV STLIASVTYNASHHVEYYQTFQILDIALIALREELYNFSNVCNLKLDDKGAIHPYSHILTKLLSSTLELSTLASNISIRN DIAYCQKTMLDLYVHYLNRPKIASILSKNSVARIEFGEPPVYGEFVSQINSTIAILQRTKVLKVNAESSSRILQYACKDF TQIQRKLTKSTNDPQVLLGTENDVLISTEEPMFELPQSTHITSLTSMAHGTGYHIN
Sequences:
>Translated_456_residues MLVPEYSHIEDPLRNASIGSVSFLEAVLSEIIENGISSKKVSDAFVFSLIYARNAVSITPHCRPLGSQSVAHAAYILNCI MENNMKADQTFSQWFSYTNDNLTRVLEHLSTSLEHPNIKQHVVCTEERYEAVKTCIFPVITAMMITYHSSMPQIPKQSFK ELLEKDNIINKKYSTLKRIIFNTISALIQEAPNYKSKTREDYNSGISCITEIIDRMSLLLNSRTPLSDRSRISMCLHSAV STLIASVTYNASHHVEYYQTFQILDIALIALREELYNFSNVCNLKLDDKGAIHPYSHILTKLLSSTLELSTLASNISIRN DIAYCQKTMLDLYVHYLNRPKIASILSKNSVARIEFGEPPVYGEFVSQINSTIAILQRTKVLKVNAESSSRILQYACKDF TQIQRKLTKSTNDPQVLLGTENDVLISTEEPMFELPQSTHITSLTSMAHGTGYHIN >Mature_456_residues MLVPEYSHIEDPLRNASIGSVSFLEAVLSEIIENGISSKKVSDAFVFSLIYARNAVSITPHCRPLGSQSVAHAAYILNCI MENNMKADQTFSQWFSYTNDNLTRVLEHLSTSLEHPNIKQHVVCTEERYEAVKTCIFPVITAMMITYHSSMPQIPKQSFK ELLEKDNIINKKYSTLKRIIFNTISALIQEAPNYKSKTREDYNSGISCITEIIDRMSLLLNSRTPLSDRSRISMCLHSAV STLIASVTYNASHHVEYYQTFQILDIALIALREELYNFSNVCNLKLDDKGAIHPYSHILTKLLSSTLELSTLASNISIRN DIAYCQKTMLDLYVHYLNRPKIASILSKNSVARIEFGEPPVYGEFVSQINSTIAILQRTKVLKVNAESSSRILQYACKDF TQIQRKLTKSTNDPQVLLGTENDVLISTEEPMFELPQSTHITSLTSMAHGTGYHIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51480; Mature: 51480
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVPEYSHIEDPLRNASIGSVSFLEAVLSEIIENGISSKKVSDAFVFSLIYARNAVSITP CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECC HCRPLGSQSVAHAAYILNCIMENNMKADQTFSQWFSYTNDNLTRVLEHLSTSLEHPNIKQ CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCH HVVCTEERYEAVKTCIFPVITAMMITYHSSMPQIPKQSFKELLEKDNIINKKYSTLKRII HEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FNTISALIQEAPNYKSKTREDYNSGISCITEIIDRMSLLLNSRTPLSDRSRISMCLHSAV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH STLIASVTYNASHHVEYYQTFQILDIALIALREELYNFSNVCNLKLDDKGAIHPYSHILT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHH KLLSSTLELSTLASNISIRNDIAYCQKTMLDLYVHYLNRPKIASILSKNSVARIEFGEPP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCC VYGEFVSQINSTIAILQRTKVLKVNAESSSRILQYACKDFTQIQRKLTKSTNDPQVLLGT CHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC ENDVLISTEEPMFELPQSTHITSLTSMAHGTGYHIN CCCEEEECCCCHHHCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLVPEYSHIEDPLRNASIGSVSFLEAVLSEIIENGISSKKVSDAFVFSLIYARNAVSITP CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECC HCRPLGSQSVAHAAYILNCIMENNMKADQTFSQWFSYTNDNLTRVLEHLSTSLEHPNIKQ CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCH HVVCTEERYEAVKTCIFPVITAMMITYHSSMPQIPKQSFKELLEKDNIINKKYSTLKRII HEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FNTISALIQEAPNYKSKTREDYNSGISCITEIIDRMSLLLNSRTPLSDRSRISMCLHSAV HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH STLIASVTYNASHHVEYYQTFQILDIALIALREELYNFSNVCNLKLDDKGAIHPYSHILT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHH KLLSSTLELSTLASNISIRNDIAYCQKTMLDLYVHYLNRPKIASILSKNSVARIEFGEPP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCC VYGEFVSQINSTIAILQRTKVLKVNAESSSRILQYACKDFTQIQRKLTKSTNDPQVLLGT CHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC ENDVLISTEEPMFELPQSTHITSLTSMAHGTGYHIN CCCEEEECCCCHHHCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA