Click here to switch to the map view.

The map label for this gene is 88607533

Identifier: 88607533

GI number: 88607533

Start: 73558

End: 73914

Strand: Reverse

Name: 88607533

Synonym: APH_0066

Alternate gene names: NA

Gene position: 73914-73558 (Counterclockwise)

Preceding gene: 88606778

Following gene: 88606942

Centisome position: 5.02

GC content: 45.1

Gene sequence:

>357_bases
ATGTGTGTTCTCGGTGCGCTGTTGCTCGTACCAGTTTTGTTAGTGTTGGCGTTGTTTTTTTTCAACAAAAACGTGCTGAT
GCGCGCGAGTTTCGGCGAAGATTTCCGGGTAATTCTCAATAAATTCATGGCTGATATGCAAAGTAGAGCTTCGGCTCATA
CGCAGTCAAATTCCCGTGGAGGCATATCGCAAAAAGAGGCTTTGGAAATTCTCGGTCTAAGCCCTAACGCTTCTCGCGAG
CAAATAATTGCAGCCTATCATAGACTGATGAAGAATTCTCACCCAGATAGAGGCGGGTCAGCATACTTTGCCCAAAAGTT
GAATCAAGCTCGTGATAGTTTGCTTGGTAACAAGTAG

Upstream 100 bases:

>100_bases
TGCTCCTGCGCAGGCTGAATAGTGCAGTATAGGCAGTGTAGTGTAGTATATAGCGCAAATCAAGTTTCTTAGTGGCATGC
TTCTGGCATTTGTTGTTTTC

Downstream 100 bases:

>100_bases
TCCCTGCATTCTTCATGGTCCGGCTACTATTCGCGCCCCATGTCATTGTATTTATCCGTATCCACATGCAGTAAAACAAA
CCTGATTTACGTATAATTTC

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: DNAJ Domain Protein; Heat Shock Protein DNAJ N-Terminal; Heat Shock Protein DNAJ N-Terminal Domain Protein; Heat Shock Protein DNAJ-Like; DNAJ Domain Containing Protein; Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ-Class Molecular Chaperone; Related Chaperon Protein DNAJ

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MCVLGALLLVPVLLVLALFFFNKNVLMRASFGEDFRVILNKFMADMQSRASAHTQSNSRGGISQKEALEILGLSPNASRE
QIIAAYHRLMKNSHPDRGGSAYFAQKLNQARDSLLGNK

Sequences:

>Translated_118_residues
MCVLGALLLVPVLLVLALFFFNKNVLMRASFGEDFRVILNKFMADMQSRASAHTQSNSRGGISQKEALEILGLSPNASRE
QIIAAYHRLMKNSHPDRGGSAYFAQKLNQARDSLLGNK
>Mature_118_residues
MCVLGALLLVPVLLVLALFFFNKNVLMRASFGEDFRVILNKFMADMQSRASAHTQSNSRGGISQKEALEILGLSPNASRE
QIIAAYHRLMKNSHPDRGGSAYFAQKLNQARDSLLGNK

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13037; Mature: 13037

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVLGALLLVPVLLVLALFFFNKNVLMRASFGEDFRVILNKFMADMQSRASAHTQSNSRG
CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GISQKEALEILGLSPNASREQIIAAYHRLMKNSHPDRGGSAYFAQKLNQARDSLLGNK
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCVLGALLLVPVLLVLALFFFNKNVLMRASFGEDFRVILNKFMADMQSRASAHTQSNSRG
CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GISQKEALEILGLSPNASREQIIAAYHRLMKNSHPDRGGSAYFAQKLNQARDSLLGNK
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA