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The map label for this gene is p44-1 [H]

Identifier: 88607426

GI number: 88607426

Start: 1264142

End: 1265383

Strand: Reverse

Name: p44-1 [H]

Synonym: APH_1195

Alternate gene names: 88607426

Gene position: 1265383-1264142 (Counterclockwise)

Preceding gene: 88607714

Following gene: 88606873

Centisome position: 86.01

GC content: 44.85

Gene sequence:

>1242_bases
ATGTTCTCATTTTCTTTAAAAGGCAGACCTTCCTTTTTCGAAATAGCCTTTTCTTTAGGAAGCGTAATGATGTCTATGGC
TATAGTCATGGCTGGGAGTGATGTCAGGGCTCATGATGACGTTAGCGCTTTGGAGACTGGTGGTGCGGGATATTTCTATG
TTGGTTTGGATTACAGTCCAGCGTTTAGCAAGATAAGAGATTTTAGTATAAGGGAGAGTAACGGAGAGACTAAGGCAGTA
TATCCATACTTAAAGGATGGAAAGAGTGTAAAGCTAGAGTCACACAAGTTTGACTGGAACACACCTGATCCTCGGATTGG
GTTTAAGGACAACATGCTTGTAGCTATGGAAGGCAGTGTTGGGTACGGTATTGGTGGTGCCAGGGTTGAGCTTGAGATTG
GTTACGAGCGTTTCAAGACTAAGGGTATTAGAGATAGTGGTAGTAAGGAAGATGAAGCTGATACAGTATATCTACTAGCT
AAGGAGTTAGCTTATGATGTTGTTACTGGGCAGACTGATAACCTTGCTGCTGCTCTTGCCAAAACCTCCGGTAAGGACAT
CGTTCAGTTTGCTAAGGCGGTGGAGATCTCTTACCCTAGTATCGATGGGAAGGTTTGTAGTGGAAAGCATGCGGCGCTTG
CAGCAAACACGAACGCGGAGAAAAAGTACGCGGTTGAGCCTGCGAACGGCGGAACAGACGGGAGCACGTCGCAGTGTAGT
GGTTTGAGTAATGGTAGTGCGGAGGCTGCTCATAAATATTTGAGTAAGTTTGTAAGTCTTACGGGAGTGGTTGAAGGGAA
AAACTGGCCTACTGGTAGATCGAGTAACAACAGCAATAGCATTGTAGTTGGAGCACCTAATAGTAACGCAAACGCGATGG
CCAAAGATCTAGTAAAGGAACTAACACCAGAGGAGAAAACCATAGTTGCCGGGTTACTAGCTAAAACTATTGAAGGGGGT
GAGGTTGTAGAAATTAGGGCGGTTTCTTCTACTTCTGTAATGGTCAATGCTTGTTATGATCTTCTTAGTGAAGGTTTAGG
TGTTGTTCCTTATGCTTGTGTTGGTTTAGGTGGTAACTTCGTAGGTGTTGTTGATGGGCATATCACTCCTAAGCTTGCTT
ATAGGTTAAAGGCTGGCTTGAGTTATCAGCTCTCTCCTGAAATCTCCGCTTTTGCGGGTGGATTCTACCATCGTGTTGTG
GGAGATGGCGTTTATGATGATCTGCCGGAGCCTATGCAATAA

Upstream 100 bases:

>100_bases
CTTATATATTGTTGTTCATGAAACGTGCGTAATGCTATGGGAGATTACTATTCTTATGTGTGTAAATTAAGCAAATTTAG
CACGTGCTACTGCACCCAGC

Downstream 100 bases:

>100_bases
TTCTTATTATTGAAAACAAGACCAAGGGTATTAGAGATAGTGGTAGTAAGGAAGATGAAGCTGATACAGTATATCTACTA
GCTAAGGAGTTAGCTTATGA

Product: P44-1 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MFSFSLKGRPSFFEIAFSLGSVMMSMAIVMAGSDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAV
YPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLA
KELAYDVVTGQTDNLAAALAKTSGKDIVQFAKAVEISYPSIDGKVCSGKHAALAANTNAEKKYAVEPANGGTDGSTSQCS
GLSNGSAEAAHKYLSKFVSLTGVVEGKNWPTGRSSNNSNSIVVGAPNSNANAMAKDLVKELTPEEKTIVAGLLAKTIEGG
EVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVV
GDGVYDDLPEPMQ

Sequences:

>Translated_413_residues
MFSFSLKGRPSFFEIAFSLGSVMMSMAIVMAGSDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAV
YPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLA
KELAYDVVTGQTDNLAAALAKTSGKDIVQFAKAVEISYPSIDGKVCSGKHAALAANTNAEKKYAVEPANGGTDGSTSQCS
GLSNGSAEAAHKYLSKFVSLTGVVEGKNWPTGRSSNNSNSIVVGAPNSNANAMAKDLVKELTPEEKTIVAGLLAKTIEGG
EVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVV
GDGVYDDLPEPMQ
>Mature_413_residues
MFSFSLKGRPSFFEIAFSLGSVMMSMAIVMAGSDVRAHDDVSALETGGAGYFYVGLDYSPAFSKIRDFSIRESNGETKAV
YPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLA
KELAYDVVTGQTDNLAAALAKTSGKDIVQFAKAVEISYPSIDGKVCSGKHAALAANTNAEKKYAVEPANGGTDGSTSQCS
GLSNGSAEAAHKYLSKFVSLTGVVEGKNWPTGRSSNNSNSIVVGAPNSNANAMAKDLVKELTPEEKTIVAGLLAKTIEGG
EVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVV
GDGVYDDLPEPMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 43733; Mature: 43733

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSFSLKGRPSFFEIAFSLGSVMMSMAIVMAGSDVRAHDDVSALETGGAGYFYVGLDYSP
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEEECCCH
AFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSV
HHHHHHCCEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC
GYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDNLAAALA
CCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
KTSGKDIVQFAKAVEISYPSIDGKVCSGKHAALAANTNAEKKYAVEPANGGTDGSTSQCS
HCCCHHHHHHHHHHEEECCCCCCEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCHHCC
GLSNGSAEAAHKYLSKFVSLTGVVEGKNWPTGRSSNNSNSIVVGAPNSNANAMAKDLVKE
CCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
LTPEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNF
HCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCE
VGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPEPMQ
EEEECCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHHHHHCCCHHHCCCCCCC
>Mature Secondary Structure
MFSFSLKGRPSFFEIAFSLGSVMMSMAIVMAGSDVRAHDDVSALETGGAGYFYVGLDYSP
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEEECCCH
AFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSV
HHHHHHCCEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC
GYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDNLAAALA
CCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
KTSGKDIVQFAKAVEISYPSIDGKVCSGKHAALAANTNAEKKYAVEPANGGTDGSTSQCS
HCCCHHHHHHHHHHEEECCCCCCEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCHHCC
GLSNGSAEAAHKYLSKFVSLTGVVEGKNWPTGRSSNNSNSIVVGAPNSNANAMAKDLVKE
CCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
LTPEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNF
HCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEECCCCE
VGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPEPMQ
EEEECCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]