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The map label for this gene is 88607368

Identifier: 88607368

GI number: 88607368

Start: 1390210

End: 1390827

Strand: Reverse

Name: 88607368

Synonym: APH_1323

Alternate gene names: NA

Gene position: 1390827-1390210 (Counterclockwise)

Preceding gene: 88607514

Following gene: 88607196

Centisome position: 94.53

GC content: 40.29

Gene sequence:

>618_bases
ATGATTAGGGTCGTTTGCACAAATTGCAGTGCTGTGTATAGCGTAGCGGGTACAAGAATTCCTAAGAAAGGGAAAGAGGT
AAAGTGTTCTCACTGTCACCACACGTGGCTTTTTATGCCAGAAAATGTGAGTATACCTTCTAAAGGTCCGCCTGGTGGTA
AAAAAGAACGGGTAGAGAAGTTCTTTTGGGGGAAGACTTTGATACAAATGATAATTTTATTTCCCCTTTTGTTCTTCTTT
TCGTCCTCCTTTCAAGATCGTTTCTCATACACCTTTAGAAAGATTTATCGCTTAACCGAGATCTATGACACTTCTGACAT
TAAGTTGCGTAGCTCCGGGGTGGAAGTATTAGAAGTGCATGGTGATGGTACCATGCAAGTGAGAGTCAGGTGGATCATAA
TAAATAACGCGGACAAGGAACGATTTGTGCCTGATGTGCGCTTTACTTTCTATGATGAGAACCAAAAAAGTGTATTCTCA
AAAAAAATAGAAGTAGATAAGTACAATGTGATAAAAAGCAAGACAGGTATGCATTTCGAAAGGGTCATTGAGGGAGTGCC
CAGTTCAGCAAATACAGTTCAGGTTCGTGCAGGTAACGCTTTTGAGATCTTTTTCTAA

Upstream 100 bases:

>100_bases
TCTAAAATCGTCCACTATTTGGCTTCCAGTAAATACCTCAATCTGGACATGTAATAGAAAATACGGTATAACAGAACCTG
TTTTTCTCCTGCATACTAAT

Downstream 100 bases:

>100_bases
CGATATACCGGAGTTTACCGTAACAGAAATTACGGGTGTGCTGCAAAGATTCATGCAGGAAACGTTCTATAGCATAAAAG
TTAGAGGGGAAATTAGTGGC

Product: zinc finger-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIRVVCTNCSAVYSVAGTRIPKKGKEVKCSHCHHTWLFMPENVSIPSKGPPGGKKERVEKFFWGKTLIQMIILFPLLFFF
SSSFQDRFSYTFRKIYRLTEIYDTSDIKLRSSGVEVLEVHGDGTMQVRVRWIIINNADKERFVPDVRFTFYDENQKSVFS
KKIEVDKYNVIKSKTGMHFERVIEGVPSSANTVQVRAGNAFEIFF

Sequences:

>Translated_205_residues
MIRVVCTNCSAVYSVAGTRIPKKGKEVKCSHCHHTWLFMPENVSIPSKGPPGGKKERVEKFFWGKTLIQMIILFPLLFFF
SSSFQDRFSYTFRKIYRLTEIYDTSDIKLRSSGVEVLEVHGDGTMQVRVRWIIINNADKERFVPDVRFTFYDENQKSVFS
KKIEVDKYNVIKSKTGMHFERVIEGVPSSANTVQVRAGNAFEIFF
>Mature_205_residues
MIRVVCTNCSAVYSVAGTRIPKKGKEVKCSHCHHTWLFMPENVSIPSKGPPGGKKERVEKFFWGKTLIQMIILFPLLFFF
SSSFQDRFSYTFRKIYRLTEIYDTSDIKLRSSGVEVLEVHGDGTMQVRVRWIIINNADKERFVPDVRFTFYDENQKSVFS
KKIEVDKYNVIKSKTGMHFERVIEGVPSSANTVQVRAGNAFEIFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23728; Mature: 23728

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVVCTNCSAVYSVAGTRIPKKGKEVKCSHCHHTWLFMPENVSIPSKGPPGGKKERVEK
CEEEEEECCHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
FFWGKTLIQMIILFPLLFFFSSSFQDRFSYTFRKIYRLTEIYDTSDIKLRSSGVEVLEVH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEE
GDGTMQVRVRWIIINNADKERFVPDVRFTFYDENQKSVFSKKIEVDKYNVIKSKTGMHFE
CCCEEEEEEEEEEEECCCHHHCCCCEEEEEEECCCHHHHHHHCCCCCEEEECCCCCCHHH
RVIEGVPSSANTVQVRAGNAFEIFF
HHHHCCCCCCCEEEEEECCEEEEEC
>Mature Secondary Structure
MIRVVCTNCSAVYSVAGTRIPKKGKEVKCSHCHHTWLFMPENVSIPSKGPPGGKKERVEK
CEEEEEECCHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
FFWGKTLIQMIILFPLLFFFSSSFQDRFSYTFRKIYRLTEIYDTSDIKLRSSGVEVLEVH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEE
GDGTMQVRVRWIIINNADKERFVPDVRFTFYDENQKSVFSKKIEVDKYNVIKSKTGMHFE
CCCEEEEEEEEEEEECCCHHHCCCCEEEEEEECCCHHHHHHHCCCCCEEEECCCCCCHHH
RVIEGVPSSANTVQVRAGNAFEIFF
HHHHCCCCCCCEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA