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The map label for this gene is yjeF [H]

Identifier: 88606871

GI number: 88606871

Start: 615691

End: 617070

Strand: Direct

Name: yjeF [H]

Synonym: APH_0588

Alternate gene names: 88606871

Gene position: 615691-617070 (Clockwise)

Preceding gene: 88607711

Following gene: 88607847

Centisome position: 41.85

GC content: 42.46

Gene sequence:

>1380_bases
GTGCATAGAATTCTCTCTGTTAACCAATTTAGAACATGTGAGCAGGGTTCTTCTATCGCAGAGGAAGAACTGATTTCTCG
AGCTGGCGCTGCAGTCGTACAAGAGTTAGTATCTCGCTTTCCTAAGTCACCAGTATTGGTTCTGTGCGGGCCGGGAAATA
ATGGAAAAGACGGTGCGGTTATTGCTAATCTTCTACGTGATAAGGGGTGGTCTGTTAGACTACTGTGCTATCGGAGTAAT
ATACCCGATGGATTTGCATTAGAGCCAGATGGTTTTGTACTAGAAGAACCATTAATCATAGATTCTATTTTTGGGATCGG
ATTGTCTAGACCATTGGAAGAGGATTTGTCATCTATAGTGCAGCAGATAAATGTCAGTGGTAAATTTGTAGTATCTGTGG
ATATCCCTACTGGTATAAATAGCGACACAGGTGAAGTAATGGGAGCAGCAATCAAGGCGGATCTTACTGTTACCTTTTCT
TGTTTAAAGCTTGGACATGTAATATCACCTGGGAGACAGCATTCTGGTGTTGTATGCGTTAAAGACATAGGTTTGGAAGT
ATGTGATTCTACAGTATCCCTCAATTCTCCGGCGTTGTGGGAGAAATCAATGGCTCGCTTAAGCTATAAGTCACATAAGT
ACAATAGAGGTTATGCCGCAATTTGCTCTCTAGGAATTAGGTCTATAGGAGCGGTAAAATTGGCTTCGCTTGCAGCATTG
AGAACTGGCCCTGGAGCAGTTGCAGTCGCTTGCGAGGAGGATGAAGTTGTATTATATGCTAGCACGCTCCTCTCAGTGAT
GTATAAAGCACATGAAGAGATTATACGTGATGAAAAAGTCACTTCTATATTGATAGGGCCTGGTGGTGAATTATCAGACG
CTTCTATAAAAAACAAAGTACTGAATGTATTGGAGAGTGGTGATAGGGGTTATGTGCTAGATGCTGGAGCCCTGTCGGTT
TTTAAGGATTGCAGTGATATCTTGTTTAAAAGCATAAGTAAAAAGCGAGTGGTGCTTACGCCTCATGAAGGAGAATTCGA
GCGTCTTTTCCCAGGATTAAAAGGCACCGTTGTAGAACGTGCGCGTGCGGCTACAACAATCTCAAATGCTATTGTTGTAT
TAAAGGGACATGATACTGTGATAGCTTCGCCTGAGGGTAGGGTTGTAGTGAATAATAATGCACCATGTGCGTTGGCGACA
ATAGGTAGCGGTGATGTATTAGCAGGTATGATTACAGGGTTAATAGCTACGGGCATGAATGAGTTTGATGCTGCTTGTTG
CGCTGTATGGGTACATGGAGAATGTGGGAAGAAATACAGATTAGGTTTAATTGCCGAAGACATAATAAGTCAAATTTCCG
AGGTATTGTCTGCACTATAG

Upstream 100 bases:

>100_bases
AGAGGAAAAATTATGCTAAGAGGAAGATATATAGAAGAGTATATTAGTTTGTAGCATAACTTGTTATATTTACACTAAGC
TGTCTTTCTAGGTATAGGTA

Downstream 100 bases:

>100_bases
CAATGCTCTACAGCATTTATGCTTAATTTTGGGGTATTCGTTCAAGCATTCTACTCTGCACCCGACTGATATTGGATTTT
GCCGCTATTTTTTCAGAAAT

Product: YjeF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MHRILSVNQFRTCEQGSSIAEEELISRAGAAVVQELVSRFPKSPVLVLCGPGNNGKDGAVIANLLRDKGWSVRLLCYRSN
IPDGFALEPDGFVLEEPLIIDSIFGIGLSRPLEEDLSSIVQQINVSGKFVVSVDIPTGINSDTGEVMGAAIKADLTVTFS
CLKLGHVISPGRQHSGVVCVKDIGLEVCDSTVSLNSPALWEKSMARLSYKSHKYNRGYAAICSLGIRSIGAVKLASLAAL
RTGPGAVAVACEEDEVVLYASTLLSVMYKAHEEIIRDEKVTSILIGPGGELSDASIKNKVLNVLESGDRGYVLDAGALSV
FKDCSDILFKSISKKRVVLTPHEGEFERLFPGLKGTVVERARAATTISNAIVVLKGHDTVIASPEGRVVVNNNAPCALAT
IGSGDVLAGMITGLIATGMNEFDAACCAVWVHGECGKKYRLGLIAEDIISQISEVLSAL

Sequences:

>Translated_459_residues
MHRILSVNQFRTCEQGSSIAEEELISRAGAAVVQELVSRFPKSPVLVLCGPGNNGKDGAVIANLLRDKGWSVRLLCYRSN
IPDGFALEPDGFVLEEPLIIDSIFGIGLSRPLEEDLSSIVQQINVSGKFVVSVDIPTGINSDTGEVMGAAIKADLTVTFS
CLKLGHVISPGRQHSGVVCVKDIGLEVCDSTVSLNSPALWEKSMARLSYKSHKYNRGYAAICSLGIRSIGAVKLASLAAL
RTGPGAVAVACEEDEVVLYASTLLSVMYKAHEEIIRDEKVTSILIGPGGELSDASIKNKVLNVLESGDRGYVLDAGALSV
FKDCSDILFKSISKKRVVLTPHEGEFERLFPGLKGTVVERARAATTISNAIVVLKGHDTVIASPEGRVVVNNNAPCALAT
IGSGDVLAGMITGLIATGMNEFDAACCAVWVHGECGKKYRLGLIAEDIISQISEVLSAL
>Mature_459_residues
MHRILSVNQFRTCEQGSSIAEEELISRAGAAVVQELVSRFPKSPVLVLCGPGNNGKDGAVIANLLRDKGWSVRLLCYRSN
IPDGFALEPDGFVLEEPLIIDSIFGIGLSRPLEEDLSSIVQQINVSGKFVVSVDIPTGINSDTGEVMGAAIKADLTVTFS
CLKLGHVISPGRQHSGVVCVKDIGLEVCDSTVSLNSPALWEKSMARLSYKSHKYNRGYAAICSLGIRSIGAVKLASLAAL
RTGPGAVAVACEEDEVVLYASTLLSVMYKAHEEIIRDEKVTSILIGPGGELSDASIKNKVLNVLESGDRGYVLDAGALSV
FKDCSDILFKSISKKRVVLTPHEGEFERLFPGLKGTVVERARAATTISNAIVVLKGHDTVIASPEGRVVVNNNAPCALAT
IGSGDVLAGMITGLIATGMNEFDAACCAVWVHGECGKKYRLGLIAEDIISQISEVLSAL

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=471, Percent_Identity=29.0870488322718, Blast_Score=153, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17509719, Length=155, Percent_Identity=29.6774193548387, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 48666; Mature: 48666

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRILSVNQFRTCEQGSSIAEEELISRAGAAVVQELVSRFPKSPVLVLCGPGNNGKDGAV
CCCCCCCHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
IANLLRDKGWSVRLLCYRSNIPDGFALEPDGFVLEEPLIIDSIFGIGLSRPLEEDLSSIV
HHHHHHCCCCEEEEEEEECCCCCCCEECCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHH
QQINVSGKFVVSVDIPTGINSDTGEVMGAAIKADLTVTFSCLKLGHVISPGRQHSGVVCV
HHHCCCCEEEEEEECCCCCCCCCHHHHHHHEEECCEEEEHHHHHHHHCCCCCCCCCEEEE
KDIGLEVCDSTVSLNSPALWEKSMARLSYKSHKYNRGYAAICSLGIRSIGAVKLASLAAL
ECCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
RTGPGAVAVACEEDEVVLYASTLLSVMYKAHEEIIRDEKVTSILIGPGGELSDASIKNKV
CCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH
LNVLESGDRGYVLDAGALSVFKDCSDILFKSISKKRVVLTPHEGEFERLFPGLKGTVVER
HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCHHHHHH
ARAATTISNAIVVLKGHDTVIASPEGRVVVNNNAPCALATIGSGDVLAGMITGLIATGMN
HHHHHHHCCEEEEEECCCEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCC
EFDAACCAVWVHGECGKKYRLGLIAEDIISQISEVLSAL
HHCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHRILSVNQFRTCEQGSSIAEEELISRAGAAVVQELVSRFPKSPVLVLCGPGNNGKDGAV
CCCCCCCHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
IANLLRDKGWSVRLLCYRSNIPDGFALEPDGFVLEEPLIIDSIFGIGLSRPLEEDLSSIV
HHHHHHCCCCEEEEEEEECCCCCCCEECCCCCEECCCHHHHHHHHCCCCCCHHHHHHHHH
QQINVSGKFVVSVDIPTGINSDTGEVMGAAIKADLTVTFSCLKLGHVISPGRQHSGVVCV
HHHCCCCEEEEEEECCCCCCCCCHHHHHHHEEECCEEEEHHHHHHHHCCCCCCCCCEEEE
KDIGLEVCDSTVSLNSPALWEKSMARLSYKSHKYNRGYAAICSLGIRSIGAVKLASLAAL
ECCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
RTGPGAVAVACEEDEVVLYASTLLSVMYKAHEEIIRDEKVTSILIGPGGELSDASIKNKV
CCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH
LNVLESGDRGYVLDAGALSVFKDCSDILFKSISKKRVVLTPHEGEFERLFPGLKGTVVER
HHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCCCCCHHHHHH
ARAATTISNAIVVLKGHDTVIASPEGRVVVNNNAPCALATIGSGDVLAGMITGLIATGMN
HHHHHHHCCEEEEEECCCEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCC
EFDAACCAVWVHGECGKKYRLGLIAEDIISQISEVLSAL
HHCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]