| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
Click here to switch to the map view.
The map label for this gene is 88606821
Identifier: 88606821
GI number: 88606821
Start: 986295
End: 986429
Strand: Reverse
Name: 88606821
Synonym: APH_0921
Alternate gene names: NA
Gene position: 986429-986295 (Counterclockwise)
Preceding gene: 88607502
Following gene: 88607764
Centisome position: 67.05
GC content: 41.48
Gene sequence:
>135_bases ATGCCATTGGAGAGGCATTCTCTGCACTTCAGAATAGATATATCAAAGAAAATCTCTCGTAAGGCAGAGACCTTTGTTTC ATATGTAGGGGTTCTACTTCGCTTTAGGTGGGTGTTTTATAGGGTTGGGTGTTGA
Upstream 100 bases:
>100_bases TCCTACACCAGAGATCGAAGAAGTCTTTTGCCTTGGATAGTGTGAAACCCTCAGTTTCGTATGTATAGATCATGCCCTTC TAGTTTCCATACGGTGACTC
Downstream 100 bases:
>100_bases TGCTTATAAGACACATTTCTTCTTACACATGGTGCAATACTGCCCGTGTTATCATTCGTCAGCATTATCGGGTTAAGAAC TCTCTTTTCCGGTGAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 43
Protein sequence:
>44_residues MPLERHSLHFRIDISKKISRKAETFVSYVGVLLRFRWVFYRVGC
Sequences:
>Translated_44_residues MPLERHSLHFRIDISKKISRKAETFVSYVGVLLRFRWVFYRVGC >Mature_43_residues PLERHSLHFRIDISKKISRKAETFVSYVGVLLRFRWVFYRVGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5342; Mature: 5211
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLERHSLHFRIDISKKISRKAETFVSYVGVLLRFRWVFYRVGC CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLERHSLHFRIDISKKISRKAETFVSYVGVLLRFRWVFYRVGC CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA