| Definition | Methanospirillum hungatei JF-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007796 |
| Length | 3,544,738 |
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Identifier: 88603310
GI number:
Start: 2330191
End: 2336232
Strand: Reverse
Name: Not Available
Synonym: Mhun_2061
Alternate gene names: NA
Gene position: NA
Preceding gene: 88603313
Following gene: 88603309
Centisome position: NA
GC content: NA
Gene sequence:
>6042_bases GTGAATACTGAAAAATTTCCGCCAGATCAACAGAGTGTACCTGATGGGTCATCCCCGCTCTCTCTCATCGTTGAGTATGA TTCGGCAATCAGCTATGCGGTTCAGCAGAACCGGATTCCTGTCATCAAGCGGATAAAGGTCGGGAACCTGGCAGATACTC CCTTACATGCCTTACGTCTTTGCATCACATCAGATCCCTCTTTTTCTGATCCTTATGAGATCATCATATCAAAGATATCA CCTGGGGAGACCTTTACCATTCATACGATCCCTCTCATCCTTCGTCATGGATTTTTCAGAACGGTCGTTTCTCCGGTTCA TGGTTCATTCACGGCTGAGATCTCGTACCAAGGGAAACCACTTCTCATTCAGTCATACTCGGTCAGGATTCTTGCCTATG ATCAATGGAGTGGTCTTCGGTCAGTTCCTGAACTCATATCTGCGTTTATCATCCCGAACAGTCCTGAAATTACTGCAATC GTACAAAAAGCACAGGATATCCTGTATAGGTGGACCAGGGACTCCTCACTGACCGGGTATCAGACTCGTGACAGTAACCG GGTCAGGAAGATGGCAGCGGCGGTCTATGCTGCACTCCAGGATCTGCATATCAGGTATGCGACACCTGAAGCCGGGTTTG AACAGGAAGGGCAGAAGGTAAGGCTTGCAGATACGATAATCGGGGAACGGATGGGAAACTGCCTTGATCTCTCCCTTCTG TATGCCGGATGTCTTGAGCGAATCGGTCTTCATCCCCTCATATGTATCACTGAGGGCCATGCCTTTGCCGGATGCTGGCT GATTCCTGACACCTTCAGTGATGTGGTCATTGAAGCATCTCTGCCCATCAAAAAGCGGGTAGAACTTGGTGAAATTCTCC TTCTTGACGTGGTGACGGCGACGTCTGATACCCCTGTATCTTTTGAGATGTCTGTGACCAGTGGAGCCGGTCACCTCTCT GACAGTCAGGGTTTTTTCTGTGCTATTGATATAAAGACCTCACGAAATGGGAGATATAATATCATTCCTCTTCCGGTGTG GGCAGAAGAACTGGCAGTTTCAGATGAAACCCCGATACCGGATGATCAGGACCGGAGAACAGAGCCGGATAATCTCTCTG AAGGAGATGGATCTAGCGGTTCCATCCCTGCTCCTCCTGGCGATATTCACCCGCCCCTGCCTTTCTTTCCATATGAGAAG AGACGATCCTGCTATCCCCGGCTCGAACGGTGGATGCATAATCTCCTTGATCTCACGCTTAGAAACCACCTGTTGAATAT GTATAATTCGGGGTCTCATCTCACGCTTCTGACTCCGGATCTCACACGGCTGAAGGATGCGGTTTTTGAAGGGAGAGCGT TTCATGTGCATCACTTTGATCATACCGGAGAAGTTACCCCCCACTCCCTGCTCCCGCATGATCCCCTGTTTGGGTATTTT GTCGAGGAACTGGGCAGGAATCGATTATATTGTCAGATATCAGAGAAAGAACTGAGTAAAAGACTGTACAATCTCTATGC CCAGGCGAAGAAGTCTTTGGAAGAGAGCGGAGCAGAAACCCTCTACCTTGCACTCGGGACCCTGATATGGTATGAGACAG ACATCTCTGATACACCCCTTCATGCACCCATCCTGCTCATACCCCTTGAAATAACCAGAAAAGATGTGACTACCGGGTTT TCCATCCGGATGGGAGATGACGAACCACGGATCAACACAACCCTGTTAGAGCGACTGTATCAGGATTTTCAGATTGAGAT ATCTTCCATCGATCCACTTCCGATAGATGAGCACGGGGTGGATGTTGCCGCAGTCCTGCACCAGTTCAGGAAGAGTGTGA AGAATCTGCCCAGATATGAGGTAGTGAGCACGGCAGTCATCGGTCACTTCACCTTCCTTAAGTATCTCATGTGGCGGGAT CTCTCTACCTATGCTGAAGCCTTCATGGAGAATCCCCTGGTGAGTAATCTCGTGGAACCCCACCTCTTTCCGTACCCGAA GGATGGATCATTTCGAAAGCCGGCAACCCTTGATTTGGCTGTGCAGCCGGGAGATGCGTTCTGCCCGGTTGGTGTTGATT CGTCACAGCTTGCTGCAGTCATTGCTGCCGGGGAAGGGAAGACCTTTGTCCTCCATGGACCACCGGGGACCGGCAAGTCG CAGACCATCACTAATATCATCGCCCACTGTCTGGCTCTTGGGAAGACGGTATTATTTGTGTCAGAAAAAAGGGTAGCCCT TGATGTTGTTCACAGCCGGCTGAAAGAGTCCGGCCTTGCACCATTCTGCCTTGAACTTCACTCGAACAAGAGCCATAAAC GGGAGGTATTACGCCAGTTTGAAGAGGTCCTTTCCTTGGATGAATTACCTGCTCCTGATGACTGGTCATTGTATGCCGAA TATCTTGCCGACCTTCGGGCCGGGCTGAACTCCTATGTCCACGCCCTTCATTCGGTCAGGAGCACCGGGGAGAGTTTCTA CCAGGGGCTCGAGCGTCTTATTCGTCTTCGAAATGTAGAGTATATACCCCTTTCATGGCCGGATGCATCTGATTGTACGA GGGAAACGCTTCAGGATATCCAGGCATTTATCCATGACAGCCGGATCATCACCGGGCAGATCGTCCATCCACGGGATAAT GTCTGGGCAGGTGTCCACTGCACGGAGTGGAGTGCCAGATGGAAGACGGCAGTGGAGACGGGGCTTGGACATTTCAGATC CTCTATTGAGAAACTTTCTTCCCTCTTTCCAATTCTGTGTGATATTCTGGGAATTGATCCGGCATCTCCCTCGTCATTTC TCAACGAGATTATCCCGATATACCGGCTACTCAGCACAGCTGGATGTGCCCTCTCCCCTGATCTGCTTCGTGCTCTTCGG GACCCCCATACCCGTAAAGAGATAGGCGGTTTCATTCAGGCCGGAAAGGAGCGGAACAGGATATGGAATTATCTGGCAGG ACGGTATCATCCAGATATCTCCCAGCTTGACTGCACCTCTCTCTCCAAAAAGATTGAGAGCATGAGATCAGCCTGGTTTC TGCGGCGGAAAGCACTGGTCAGGGAGATACAATCAGATATCCTGCCGTATTGTCTCATGTCCATTCCACCGGTTGAAGAA TTCTCTCATGACATCCCGAAGATCCACCGGATGCAGGAACTGGATAACATCATCCGGAATTTCTCTGATCGTGCCGCCCT GTTCTTTGGCCGGTACTGGAATGTGGAGGATCAGGACTTTGATATCTGTGAGAACCTAGTACGGTCAGCAGAGGCAGTTT CGGCTGCTGCATCCCGAATCAGGGCAGATGAGGATGGGTATATCCGGCTTGTCACCTGCTGGAGTGATCTGACGTTCCGG TTTATGAATGAGTCAGATGCCAGGCAGATTCGGCAGCAGTTCTCTGATTATGAGGATGCATTACACCAGTATGACCGTGA AGGATCATCCCTTGCCGATCTGCTGCAGTATGATCCCGGGATACTCTGGCCGCAGCAAACGGTGACCGATCTTCTCAGTG CCCAGGCTGCAACAGTTCAGCGATGGGAGAAGGAGACATCACACCTGAAGAGCTGGTGTCAGTGGAACCGGATCAGACAG GTAGCGGATGAGAAGGGGTATTCACCGGTCATCCAACGGTATGAGGATGCAACGCTTATCCATTCCCAGATTGAGGATCT GATGCTCCGGAGCTATTACCAGAACTGGGTAGATGGCATTCGTGAACAGGATCCGGTACTGAAGGAATTTTACCGCCCGA AGTTTGAGGATTCCATCGAAAAATTCAGGGAGATTGATGAGAGGTTCACCGACCTGACCAGAAAGGAGATAGAGGCCAGA CTGTCGGCACGGATCCCAAGGGGTGAAGGGGCAGAGAAGGAGGAATTAGGGGTTCTGCGTCATCAGATTCACCTGCAGCG CCGTAACATGCCGGTCAGGAGTCTTTTTAAGAGTATTCCCACAATTCTTCCGCGATTAAAGCCCTGTTTGCTGATGAGTC CGATCTCGGTTGCCCAGTACCTTGACCCTGATATCCACCGGTTTGACCTGGTCATCTTTGACGAGGCGTCGCAGATCCCG GTGTCAGATGCGATTGGGGTGATCGCACGGGGAAATTCTGCCATTATTGTTGGTGATCCAAAACAGCTTCCTCCGACCAG CCTCTTTCAGCGGATGAATGAAAGTGATGGAGATGATTTCAGGACATCTGCTCTTGATCTTGAGAGTATCCTGGATGAAT GCATTGCATCAGATATCCCACAGTTGCACCTTGCATGGCATTACCGGAGCAGGCATGAGAGTCTTATCGCCTTTAGCAAC TACCACTTTTACCGTAATCGTCTCCTGACATTTCCCTCGCCCCATACCAGCCCGGCCATCTCGCTTGTCCATATTGATGG GGTCTTTGACTCAGGAAATACCCGGACAAACCGGGCAGAGGCTGAAGCAGTGGTTAGCGAGATAGTACGGCGGCTTTGCG ATCCTGCCACGTCCTCAGACTCTATCGGGGTGATCACGTTTAACGAACGGCAGCAGGATCTCATCCGGACCCTTCTGGAG AAGGAACGGCGGATGAGGCCTGATATAGAACCTTATTTCAGTGATGACCGTCCTGATTCGGTCTTTATCAAAAACCTTGA GAATGTTCAGGGTGATGAACGGGATGTCATTCTCTTCTCTGTTGGATATGGTCCTGATAAATCGGGCAGGGTTTCCCTTA ACTTCGGGCCGCTGAACCGTGACGGGGGAGAAAGACGGCTGAATGTGGCAATTACCAGGGCACGGAAAGAGATTAAAGTA TTCTCTTCGATGACTCCGGAGCAGATCGATCTGTCCCGGACCAGGCGGATGGGAGTTGTCCTCCTGAAATCATTCCTTGA GTTCGCGGAAAAAGGGCCGAAAGCGATTGCAGAGACCTGTATCCGGGATATGGAGACGGATCTCCTGCCCATTGTGTCGG ATGTAGCGAAATCCCTTACAGATCAGGGGTATGAGGTCCATACTCATGTTGGATGCGGAGGGTACCGGATCGATGTTGCA GTACTGGACCCTGACCTGCCTGGACGGTATATTCTTGGTATTGTATGTGACGGGCCACGGTACCAGAAGGCAAAATCAGC CCGTGACCGCGACGTTCTCACCTTCTTTGTCCTGCATACCCTTGGCTGGAATATTCACCGGTTGTGGTCTACCGACTGGT GGGATGAGCAGGAGGTTGAGCTGCATCGCATCATCCACACCATTGAAAAGATCAGAAGTGAGTATGCACCGGAAACAATG CTCTATTGTCCGGTTGAGGGCGAGGAACTGGAGGAGAAATGTGAGGAAGGCGATCAGGGAGAACATGAGATCCTACAGGA TGATGGTGACGAACATGGTATCTCCGGCGATGAGGGATCTCCAAAATCCGCTGTAAAATCGTTCGAAAGATCATCCCTGC CACACCATATCCCATCCGTGCCGGTGAAATTTCCCGAGATCTGTTATGTGGCGTATGTGGGATATGAGGTCCTGGGAACA AAGGATGATCTCCTGAGTGGAACCCGTGACGAAGACATTATCCGGGTTTTACAAGAGATTGTGGCAATAGAAGGTCCTGT CCCCCGTGACATCTGTATTGCACGTCTTCTCCCCCACTGGCAGATCACAAGGAAAACCGCATCGGTAAAGAATAAAATAG AATCTCTTCTCCTATCGCTTCCCTTCCACCGGGAGACAGAAGGAAACCAGATCTTTTTCTGGTCCAATCATCAGGCATTT CTTGAATATGTGACCTTCCGCTCCCACCCGGCAGGAGATCCCTGGCAACGAAAAGCGGATGAGATATCAATGTATGAGTA TTCCAACGCGATCATCCATCTGATGAAACAGACGGGATCGATGAGCACCAGTGCGTTAACCCGCATAGTCGGTTCCCTGT TTGGAATAAAACGGATAAATCATGCACTTGAGACCAGGATAGAACAGGGTATTGCCCTTCTCATGGATCGCGGTGAGGTA CAGTGTAAAGGAGATGAACTGGTTTATGTTCCTCCTGACTGA
Upstream 100 bases:
>100_bases CATAAACACCCGCAACATACCAGATCAATAAAGGCCGGTACCGACAGCCACGATGCCGATGTGAACATGATCCTTCTCGT ATGACCAGAATGGTGATATG
Downstream 100 bases:
>100_bases TCAGAGGACGAATCCCCTGTCTTTTCAACCCATCCATATCCCTATAAATTCATTCAAATTGTATAGGAAATCTCTATATC TCCCTGAAGCATTTTAAAAA
Product: putative DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>2013_residues MNTEKFPPDQQSVPDGSSPLSLIVEYDSAISYAVQQNRIPVIKRIKVGNLADTPLHALRLCITSDPSFSDPYEIIISKIS PGETFTIHTIPLILRHGFFRTVVSPVHGSFTAEISYQGKPLLIQSYSVRILAYDQWSGLRSVPELISAFIIPNSPEITAI VQKAQDILYRWTRDSSLTGYQTRDSNRVRKMAAAVYAALQDLHIRYATPEAGFEQEGQKVRLADTIIGERMGNCLDLSLL YAGCLERIGLHPLICITEGHAFAGCWLIPDTFSDVVIEASLPIKKRVELGEILLLDVVTATSDTPVSFEMSVTSGAGHLS DSQGFFCAIDIKTSRNGRYNIIPLPVWAEELAVSDETPIPDDQDRRTEPDNLSEGDGSSGSIPAPPGDIHPPLPFFPYEK RRSCYPRLERWMHNLLDLTLRNHLLNMYNSGSHLTLLTPDLTRLKDAVFEGRAFHVHHFDHTGEVTPHSLLPHDPLFGYF VEELGRNRLYCQISEKELSKRLYNLYAQAKKSLEESGAETLYLALGTLIWYETDISDTPLHAPILLIPLEITRKDVTTGF SIRMGDDEPRINTTLLERLYQDFQIEISSIDPLPIDEHGVDVAAVLHQFRKSVKNLPRYEVVSTAVIGHFTFLKYLMWRD LSTYAEAFMENPLVSNLVEPHLFPYPKDGSFRKPATLDLAVQPGDAFCPVGVDSSQLAAVIAAGEGKTFVLHGPPGTGKS QTITNIIAHCLALGKTVLFVSEKRVALDVVHSRLKESGLAPFCLELHSNKSHKREVLRQFEEVLSLDELPAPDDWSLYAE YLADLRAGLNSYVHALHSVRSTGESFYQGLERLIRLRNVEYIPLSWPDASDCTRETLQDIQAFIHDSRIITGQIVHPRDN VWAGVHCTEWSARWKTAVETGLGHFRSSIEKLSSLFPILCDILGIDPASPSSFLNEIIPIYRLLSTAGCALSPDLLRALR DPHTRKEIGGFIQAGKERNRIWNYLAGRYHPDISQLDCTSLSKKIESMRSAWFLRRKALVREIQSDILPYCLMSIPPVEE FSHDIPKIHRMQELDNIIRNFSDRAALFFGRYWNVEDQDFDICENLVRSAEAVSAAASRIRADEDGYIRLVTCWSDLTFR FMNESDARQIRQQFSDYEDALHQYDREGSSLADLLQYDPGILWPQQTVTDLLSAQAATVQRWEKETSHLKSWCQWNRIRQ VADEKGYSPVIQRYEDATLIHSQIEDLMLRSYYQNWVDGIREQDPVLKEFYRPKFEDSIEKFREIDERFTDLTRKEIEAR LSARIPRGEGAEKEELGVLRHQIHLQRRNMPVRSLFKSIPTILPRLKPCLLMSPISVAQYLDPDIHRFDLVIFDEASQIP VSDAIGVIARGNSAIIVGDPKQLPPTSLFQRMNESDGDDFRTSALDLESILDECIASDIPQLHLAWHYRSRHESLIAFSN YHFYRNRLLTFPSPHTSPAISLVHIDGVFDSGNTRTNRAEAEAVVSEIVRRLCDPATSSDSIGVITFNERQQDLIRTLLE KERRMRPDIEPYFSDDRPDSVFIKNLENVQGDERDVILFSVGYGPDKSGRVSLNFGPLNRDGGERRLNVAITRARKEIKV FSSMTPEQIDLSRTRRMGVVLLKSFLEFAEKGPKAIAETCIRDMETDLLPIVSDVAKSLTDQGYEVHTHVGCGGYRIDVA VLDPDLPGRYILGIVCDGPRYQKAKSARDRDVLTFFVLHTLGWNIHRLWSTDWWDEQEVELHRIIHTIEKIRSEYAPETM LYCPVEGEELEEKCEEGDQGEHEILQDDGDEHGISGDEGSPKSAVKSFERSSLPHHIPSVPVKFPEICYVAYVGYEVLGT KDDLLSGTRDEDIIRVLQEIVAIEGPVPRDICIARLLPHWQITRKTASVKNKIESLLLSLPFHRETEGNQIFFWSNHQAF LEYVTFRSHPAGDPWQRKADEISMYEYSNAIIHLMKQTGSMSTSALTRIVGSLFGIKRINHALETRIEQGIALLMDRGEV QCKGDELVYVPPD
Sequences:
NA
Specific function: NA
COG id: COG1112
COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA